RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ZNF75DP51815 510 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 CDH8P55286 799 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 ERVK-21P61565 698 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 SOWAHAQ2M3V2 549 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 UVSSAQ2YD98 709 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 WDR44Q5JSH3 913 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 FAM171A1Q5VUB5 890 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 PHLDB3Q6NSJ2 640 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 RRAGAQ7L523 313 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 PPM1KQ8N3J5 372 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 CCDC150Q8NCX0 1101 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 FBXO22Q8NEZ5 403 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 GDPD5Q8WTR4 605 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 KBTBD7Q8WVZ9 684 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 ARNTL2Q8WYA1 636 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 SUSD3Q96L08 255 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 PCMTD1Q96MG8 357 aaPredicted RBP8.24□□□□□ -1.09
MSH6-211ENST00000606499 NT5C1BQ96P26 610 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 ERGIC2Q96RQ1 377 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 MMS19Q96T76 1030 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 TRIM5Q9C035 493 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 GANQ9H2C0 597 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 VRTNQ9H8Y1 702 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 GRPEL1Q9HAV7 217 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 ALG13Q9NP73 1137 aaKnown RBP8.24□□□□□ -1.09
MSH6-211ENST00000606499 GDAP2Q9NXN4 497 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 APEX2Q9UBZ4 518 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 RWDD3Q9Y3V2 267 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 TIMM13Q9Y5L4 95 aaPredicted RBP8.24□□□□□ -1.09
MSH6-211ENST00000606499 FHOD1Q9Y613 1164 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 PRUNE2Q8WUY3 3088 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 A0A1W2PQC6 194 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 C5orf67F2Z3F1 127 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 GRM6O15303 877 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 HCRTO43612 131 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 TRAPPC3O43617 180 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 HUS1O60921 280 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 NOL4O94818 638 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 TPM3P06753 285 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 WEE2P0C1S8 567 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 PNMA6AP0CW24 399 aaPredicted RBP8.23□□□□□ -1.09
MSH6-211ENST00000606499 P4HA1P13674 534 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 CD58P19256 250 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 FGFR3P22607 806 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 ORC1Q13415 861 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 CUL2Q13617 745 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 GSE1Q14687 1217 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 ARHGAP44Q17R89 818 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 RTP2Q5QGT7 225 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 KLHDC7AQ5VTJ3 777 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 WSCD1Q658N2 575 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 IQCEQ6IPM2 695 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 LIMS2Q7Z4I7 341 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 DDX53Q86TM3 631 aaKnown RBP8.23□□□□□ -1.09
MSH6-211ENST00000606499 OSTM1Q86WC4 334 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 CEP57Q86XR8 500 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 RNF168Q8IYW5 571 aaPredicted RBP8.23□□□□□ -1.09
MSH6-211ENST00000606499 ADGRF2Q8IZF7 708 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 PDCL2Q8N4E4 241 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 APPL2Q8NEU8 664 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 NEK11Q8NG66 645 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 AUTS2Q8WXX7 1259 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 LRCH3Q96II8 777 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 KREMEN1Q96MU8 473 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 SAMD11Q96NU1 681 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 MRPL45Q9BRJ2 306 aaKnown RBP8.23□□□□□ -1.09
MSH6-211ENST00000606499 C11orf84Q9BUA3 381 aaPredicted RBP8.23□□□□□ -1.09
MSH6-211ENST00000606499 HERC2P3Q9BVR0 1158 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 PLVAPQ9BX97 442 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 BCO2Q9BYV7 579 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 UBE2TQ9NPD8 197 aaPredicted RBP8.23□□□□□ -1.09
MSH6-211ENST00000606499 PLCB1Q9NQ66 1216 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 HMGXB4Q9UGU5 601 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 PCDHB8Q9UN66 801 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 PCDHGC5Q9Y5F6 944 aa8.23□□□□□ -1.09
MSH6-211ENST00000606499 CARNS1A5YM72 827 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 H3BNC9 293 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 RFXAPO00287 272 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 C2CD2LO14523 706 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 ADCY5O95622 1261 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 SOD2P04179 222 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 CYP11A1P05108 521 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 UCHL3P15374 230 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 ACO1P21399 889 aaKnown RBP8.22□□□□□ -1.09
MSH6-211ENST00000606499 PAX3P23760 479 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 TBXAS1P24557 533 aaPredicted RBP8.22□□□□□ -1.09
MSH6-211ENST00000606499 ACAT1P24752 427 aaKnown RBP8.22□□□□□ -1.09
MSH6-211ENST00000606499 GLUD2P49448 558 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 ERVFC1P60507 584 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 POLR2FP61218 127 aaKnown RBP8.22□□□□□ -1.09
MSH6-211ENST00000606499 PLCB3Q01970 1234 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 GCNT1Q02742 428 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 KRT17Q04695 432 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 ELAVL2Q12926 359 aaKnown RBP8.22□□□□□ -1.09
MSH6-211ENST00000606499 GPM6BQ13491 265 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 RAPGEF1Q13905 1077 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 CCDC142Q17RM4 750 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 USP41Q3LFD5 358 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 VARS2Q5ST30 1063 aaKnown RBP8.22□□□□□ -1.09
MSH6-211ENST00000606499 OVOS1Q6IE37 1185 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms