RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 CD320Q9NPF0 282 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 FRMD4BQ9Y2L6 1034 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 PPP1R3GB7ZBB8 358 aa16.38■□□□□ 0.21
LIG1-219ENST00000600055 CYP11A1P05108 521 aa16.38■□□□□ 0.21
LIG1-219ENST00000600055 RPL13P26373 211 aaKnown RBP16.38■□□□□ 0.21
LIG1-219ENST00000600055 CBX2Q14781 532 aaPredicted RBP16.38■□□□□ 0.21
LIG1-219ENST00000600055 EDRF1Q3B7T1 1238 aa16.38■□□□□ 0.21
LIG1-219ENST00000600055 C1orf220Q5T0J3 134 aa16.38■□□□□ 0.21
LIG1-219ENST00000600055 GPR149Q86SP6 731 aa16.38■□□□□ 0.21
LIG1-219ENST00000600055 ZNF707Q96C28 371 aaPredicted RBP16.38■□□□□ 0.21
LIG1-219ENST00000600055 HPDLQ96IR7 371 aa16.38■□□□□ 0.21
LIG1-219ENST00000600055 RTP3Q9BQQ7 232 aa16.38■□□□□ 0.21
LIG1-219ENST00000600055 CLSTN2Q9H4D0 955 aa16.38■□□□□ 0.21
LIG1-219ENST00000600055 POMKQ9H5K3 350 aa16.38■□□□□ 0.21
LIG1-219ENST00000600055 KIAA1468Q9P260 1216 aa16.38■□□□□ 0.21
LIG1-219ENST00000600055 DPP7Q9UHL4 492 aa16.38■□□□□ 0.21
LIG1-219ENST00000600055 SCN1AP35498 2009 aa16.38■□□□□ 0.21
LIG1-219ENST00000600055 DLL1O00548 723 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 ZMYND10O75800 440 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 ABLIM3O94929 683 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 SEC24AO95486 1093 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 C8AP07357 584 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 KCNA4P22459 653 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 SP100P23497 879 aaPredicted RBP16.37■□□□□ 0.21
LIG1-219ENST00000600055 CCNE1P24864 410 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 VAMP7P51809 220 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 CDR1P51861 262 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 CLDN10P78369 228 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 ZP2Q05996 745 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 ATAT1Q5SQI0 421 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 LIN9Q5TKA1 542 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 TDRD10Q5VZ19 366 aaKnown RBP16.37■□□□□ 0.21
LIG1-219ENST00000600055 KLHL10Q6JEL2 608 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 ELMSAN1Q6PJG2 1045 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 RNF19BQ6ZMZ0 732 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 ADHFE1Q8IWW8 467 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 FAM186BQ8IYM0 893 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 PDCL2Q8N4E4 241 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 CMASQ8NFW8 434 aaPredicted RBP16.37■□□□□ 0.21
LIG1-219ENST00000600055 OR10T2Q8NGX3 314 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 ZNF461Q8TAF7 563 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 SLC7A14Q8TBB6 771 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 TMC2Q8TDI7 906 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 ELMO3Q96BJ8 720 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 TSG101Q99816 390 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 PHF7Q9BWX1 381 aaPredicted RBP16.37■□□□□ 0.21
LIG1-219ENST00000600055 GTPBP4Q9BZE4 634 aaKnown RBP16.37■□□□□ 0.21
LIG1-219ENST00000600055 L1RE1Q9UN81 338 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 R3HCC1Q9Y3T6 440 aaKnown RBP16.37■□□□□ 0.21
LIG1-219ENST00000600055 SNX9Q9Y5X1 595 aa16.37■□□□□ 0.21
LIG1-219ENST00000600055 OR6C75A6NL08 312 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 PSMA7O14818 248 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 CETN3O15182 167 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 MAPK13O15264 365 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 VNN2O95498 520 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 C4BPAP04003 597 aaKnown RBP16.36■□□□□ 0.21
LIG1-219ENST00000600055 TRIM49P0CI25 452 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 TRIM49CP0CI26 452 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 CPB1P15086 417 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 PSMC2P35998 433 aaKnown RBP16.36■□□□□ 0.21
LIG1-219ENST00000600055 MTHFRP42898 656 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 MYL6P60660 151 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 MYO1EQ12965 1108 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 BIRC3Q13489 604 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 STIM1Q13586 685 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 PPM1LQ5SGD2 360 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 OSTM1Q86WC4 334 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 METTL23Q86XA0 190 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 GPT2Q8TD30 523 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 SMG7Q92540 1137 aaKnown RBP16.36■□□□□ 0.21
LIG1-219ENST00000600055 DHTKD1Q96HY7 919 aaPredicted RBP16.36■□□□□ 0.21
LIG1-219ENST00000600055 RPGRIP1Q96KN7 1286 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 RIPOR3Q96MK2 946 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 PGLYRP2Q96PD5 576 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 ZDHHC7Q9NXF8 308 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 GDAP2Q9NXN4 497 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 PRKAG3Q9UGI9 489 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 DSEQ9UL01 958 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 VCANP13611 3396 aa16.36■□□□□ 0.21
LIG1-219ENST00000600055 ARHGEF37A1IGU5 675 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 CCL16O15467 120 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 HCRTO43612 131 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 HUS1O60921 280 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 PHACTR2O75167 634 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 VNN1O95497 513 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 KRT13P13646 458 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 ATF2P15336 505 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 SSTR3P32745 418 aaPredicted RBP16.35■□□□□ 0.21
LIG1-219ENST00000600055 ADCY1Q08828 1119 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 TRPC3Q13507 836 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 SOWAHAQ2M3V2 549 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 TPGS2Q68CL5 300 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 C15orf39Q6ZRI6 1047 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 ZC3H3Q8IXZ2 948 aaKnown RBP16.35■□□□□ 0.21
LIG1-219ENST00000600055 NELFBQ8WX92 580 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 NECTIN4Q96NY8 510 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 DUSP9Q99956 384 aaKnown RBP16.35■□□□□ 0.21
LIG1-219ENST00000600055 PRKD2Q9BZL6 878 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 CYP4F11Q9HBI6 524 aa16.35■□□□□ 0.21
LIG1-219ENST00000600055 CTNND2Q9UQB3 1225 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms