RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-208ENST00000599687 EOMESO95936 686 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 ITGB1P05556 798 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 OR52Z1P0C646 297 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 SRGAP2CP0DJJ0 459 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 XRCC6P12956 609 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 SFPQP23246 707 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 TECP42680 631 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 TRAPPC10P48553 1259 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 RARRES1P49788 294 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 TOB1P50616 345 aaPredicted RBP9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 TBX4P57082 545 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 ZNF252P-AS1Q0IIN9 211 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 LAMTOR4Q0VGL1 99 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 CBX2Q14781 532 aaPredicted RBP9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 EMC2Q15006 297 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 TIGD5Q53EQ6 642 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 TCEAL5Q5H9L2 206 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 VN1R5Q7Z5H4 357 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 CATSPER3Q86XQ3 398 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 SPPL3Q8TCT6 385 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 PIGOQ8TEQ8 1089 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 TCP11Q8WWU5 503 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 PSPC1Q8WXF1 523 aaKnown RBP9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 TM9SF2Q99805 663 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 SPATA9Q9BWV2 254 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 TMEM117Q9H0C3 514 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 NSUN3Q9H649 340 aaKnown RBP9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 CWH43Q9H720 699 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 NDFIP2Q9NV92 336 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 DACT1Q9NYF0 836 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 CDH23Q9H251 3354 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 PLXNA4Q9HCM2 1894 aa9.66□□□□□ -0.86
SNRNP70-208ENST00000599687 MEIS3P2A8K0S8 358 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 MED24O75448 989 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 ATF7P17544 494 aaPredicted RBP9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 DNAJB1P25685 340 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 MCM2P49736 904 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 CLLU1OSQ5K130 101 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 CEP135Q66GS9 1140 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 LRRC55Q6ZSA7 311 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 CATSPER4Q7RTX7 472 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 SRGAP1Q7Z6B7 1085 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 DDX42Q86XP3 938 aaKnown RBP eCLIP9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 CHAC2Q8WUX2 184 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 NINJ1Q92982 152 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 ABHD17AQ96GS6 310 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 POLR3CQ9BUI4 534 aaPredicted RBP9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 NUCKS1Q9H1E3 243 aaKnown RBP9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 UBE2ZQ9H832 354 aaPredicted RBP9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 MINDY3Q9H8M7 445 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 TUFT1Q9NNX1 390 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 NOL7Q9UMY1 257 aaKnown RBP9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 KIF3AQ9Y496 699 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 PCDHB6Q9Y5E3 794 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 PCDHB12Q9Y5F1 795 aa9.65□□□□□ -0.86
SNRNP70-208ENST00000599687 TRANK1O15050 2925 aa9.65□□□□□ -0.87
SNRNP70-208ENST00000599687 TCF20Q9UGU0 1960 aaKnown RBP9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 A0A087X0B3 334 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 ZNF623O75123 536 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 RPA1P27694 616 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 GJB2P29033 226 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 HOXA11P31270 313 aaPredicted RBP9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 ARL2P36404 184 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 POU5F1BQ06416 359 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 HYAL1Q12794 435 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 PDIA5Q14554 519 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 MXD4Q14582 209 aaPredicted RBP9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 SPOUT1Q5T280 376 aaKnown RBP9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 HGSNATQ68CP4 663 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 TWF2Q6IBS0 349 aaKnown RBP9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 PDZD3Q86UT5 571 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 ABI1Q8IZP0 508 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 UBR7Q8N806 425 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 COLGALT1Q8NBJ5 622 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 RNF149Q8NC42 400 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 RNF169Q8NCN4 708 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 POF1BQ8WVV4 589 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 PABPC5Q96DU9 382 aaKnown RBP9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 EMILIN2Q9BXX0 1053 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 IGFLR1Q9H665 355 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 AGPAT5Q9NUQ2 364 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 FAM105AQ9NUU6 356 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 DBR1Q9UK59 544 aaKnown RBP9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 PCDHB10Q9UN67 800 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 SOX13Q9UN79 622 aa9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 PIN4Q9Y237 131 aaKnown RBP9.64□□□□□ -0.87
SNRNP70-208ENST00000599687 NCK2O43639 380 aa9.63□□□□□ -0.87
SNRNP70-208ENST00000599687 FGF18O76093 207 aa9.63□□□□□ -0.87
SNRNP70-208ENST00000599687 HTR3BO95264 441 aa9.63□□□□□ -0.87
SNRNP70-208ENST00000599687 GHRHP01286 108 aa9.63□□□□□ -0.87
SNRNP70-208ENST00000599687 LAG3P18627 525 aa9.63□□□□□ -0.87
SNRNP70-208ENST00000599687 MUTP22033 750 aa9.63□□□□□ -0.87
SNRNP70-208ENST00000599687 KCNA5P22460 613 aa9.63□□□□□ -0.87
SNRNP70-208ENST00000599687 GLRA2P23416 452 aa9.63□□□□□ -0.87
SNRNP70-208ENST00000599687 LTBRP36941 435 aa9.63□□□□□ -0.87
SNRNP70-208ENST00000599687 PTENP60484 403 aa9.63□□□□□ -0.87
SNRNP70-208ENST00000599687 UBE3AQ05086 875 aa9.63□□□□□ -0.87
SNRNP70-208ENST00000599687 LEXMQ3ZCV2 418 aa9.63□□□□□ -0.87
SNRNP70-208ENST00000599687 VHLLQ6RSH7 139 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms