RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 TRIM49BA6NDI0 452 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 RFPL2O75678 378 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 VNN2O95498 520 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 WEE2P0C1S8 567 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 PNPLA4P41247 253 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 ITIH3Q06033 890 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 CTXN3Q4LDR2 81 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 WSCD1Q658N2 575 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 TMC5Q6UXY8 1006 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 GPR149Q86SP6 731 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 CMASQ8NFW8 434 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-206ENST00000592942 ZNF461Q8TAF7 563 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 ADAMTS19Q8TE59 1207 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 ZNF707Q96C28 371 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-206ENST00000592942 DHTKD1Q96HY7 919 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-206ENST00000592942 GBP4Q96PP9 640 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 DUSP9Q99956 384 aaKnown RBP16.5■□□□□ 0.23
TRIM47-206ENST00000592942 CLSTN2Q9H4D0 955 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 CD320Q9NPF0 282 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 GDAP2Q9NXN4 497 aa16.5■□□□□ 0.23
TRIM47-206ENST00000592942 CCDC195A0A1B0GUA6 201 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 TNNC2P02585 160 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 KRT19P08727 400 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 CCNE1P24864 410 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 RPL13P26373 211 aaKnown RBP16.49■□□□□ 0.23
TRIM47-206ENST00000592942 SV2CQ496J9 727 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 TDRD10Q5VZ19 366 aaKnown RBP16.49■□□□□ 0.23
TRIM47-206ENST00000592942 OVOS1Q6IE37 1185 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 ZNF280DQ6N043 979 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 C15orf39Q6ZRI6 1047 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 HPDLQ96IR7 371 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 ZNF560Q96MR9 790 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 TMEM209Q96SK2 561 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 XYLT2Q9H1B5 865 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 SFXN1Q9H9B4 322 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 FRMD4BQ9Y2L6 1034 aa16.49■□□□□ 0.23
TRIM47-206ENST00000592942 C19orf67A6NJJ6 358 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 IKBKBO14920 756 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 ZMYND10O75800 440 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 SEC24AO95486 1093 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 VNN1O95497 513 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 OR4Q2P0C623 313 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 ODC1P11926 461 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 ATF2P15336 505 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 PSMC2P35998 433 aaKnown RBP16.48■□□□□ 0.23
TRIM47-206ENST00000592942 VAMP7P51809 220 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 CBX2Q14781 532 aaPredicted RBP16.48■□□□□ 0.23
TRIM47-206ENST00000592942 TTI2Q6NXR4 508 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 USP37Q86T82 979 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 FAM186BQ8IYM0 893 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 PDCL2Q8N4E4 241 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 TRIML1Q8N9V2 468 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 OR10T2Q8NGX3 314 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 MED15Q96RN5 788 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 RHOBTB2Q9BYZ6 727 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 L1RE1Q9UN81 338 aa16.48■□□□□ 0.23
TRIM47-206ENST00000592942 DOCK6Q96HP0 2047 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 GABRDO14764 452 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 CETN3O15182 167 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 AP3M2P53677 418 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 ARPP19P56211 112 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 MYL6P60660 151 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 FKBP3Q00688 224 aaKnown RBP16.47■□□□□ 0.23
TRIM47-206ENST00000592942 ZP2Q05996 745 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 LRRC63Q05C16 580 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 ENPEPQ07075 957 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 PPP3CAQ08209 521 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 BFSP1Q12934 665 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 SOWAHAQ2M3V2 549 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 UVSSAQ2YD98 709 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 ZACNQ401N2 412 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 FOXR2Q6PJQ5 311 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 RNF19BQ6ZMZ0 732 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 SV2AQ7L0J3 742 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 LRRTM3Q86VH5 581 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 OSTM1Q86WC4 334 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 UHRF1Q96T88 793 aaPredicted RBP16.47■□□□□ 0.23
TRIM47-206ENST00000592942 MKNK1Q9BUB5 465 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 OXCT2Q9BYC2 517 aaPredicted RBP16.47■□□□□ 0.23
TRIM47-206ENST00000592942 PRKD2Q9BZL6 878 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 POMKQ9H5K3 350 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 ZDHHC7Q9NXF8 308 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 PRKAG3Q9UGI9 489 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 DPP7Q9UHL4 492 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 RAPGEFL1Q9UHV5 662 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 DSEQ9UL01 958 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 FAM50BQ9Y247 325 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 SNX9Q9Y5X1 595 aa16.47■□□□□ 0.23
TRIM47-206ENST00000592942 OR6C75A6NL08 312 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 PSMA7O14818 248 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 STAU1O95793 577 aaKnown RBP16.46■□□□□ 0.23
TRIM47-206ENST00000592942 C8AP07357 584 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 PPP1R2P41236 205 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 GPR17Q13304 367 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 ATAT1Q5SQI0 421 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 TPGS2Q68CL5 300 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 CES5AQ6NT32 575 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 INTS8Q75QN2 995 aaKnown RBP16.46■□□□□ 0.23
TRIM47-206ENST00000592942 ADHFE1Q8IWW8 467 aa16.46■□□□□ 0.23
TRIM47-206ENST00000592942 TCEAL8Q8IYN2 117 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms