RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TTC38Q5R3I4 469 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 KRT79Q5XKE5 535 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 TPGS2Q68CL5 300 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 SLC8B1Q6J4K2 584 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 NPAS3Q8IXF0 933 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 LEMD2Q8NC56 503 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 APPL2Q8NEU8 664 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 ITFG1Q8TB96 612 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 BSNDQ8WZ55 320 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 DNASE1L2Q92874 299 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 ELSPBP1Q96BH3 223 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 ACAP3Q96P50 834 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 KXD1Q9BQD3 176 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 IER2Q9BTL4 223 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 RPP25Q9BUL9 199 aaKnown RBP10.31□□□□□ -0.76
BRCA1-226ENST00000591534 OXCT2Q9BYC2 517 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-226ENST00000591534 NCDNQ9UBB6 729 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 DNMT3BQ9UBC3 853 aaKnown RBP10.31□□□□□ -0.76
BRCA1-226ENST00000591534 PLXNA3P51805 1871 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 FAM186AA6NE01 2351 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 PODXLO00592 558 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 ADAM12O43184 909 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 MCF2P10911 925 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 ATF2P15336 505 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 TKTP29401 623 aaKnown RBP10.3□□□□□ -0.76
BRCA1-226ENST00000591534 MARCKSP29966 332 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-226ENST00000591534 RPS9P46781 194 aaKnown RBP10.3□□□□□ -0.76
BRCA1-226ENST00000591534 SMTNP53814 917 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 CSTF1Q05048 431 aaKnown RBP10.3□□□□□ -0.76
BRCA1-226ENST00000591534 ADCY1Q08828 1119 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 GLRA4Q5JXX5 417 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 NT5DC1Q5TFE4 455 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 EEF1DP3Q658K8 133 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 C1orf228Q6PIY5 440 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 TPRG1Q6ZUI0 275 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 PDZD4Q76G19 769 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-226ENST00000591534 TCEAL8Q8IYN2 117 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 FBXO18Q8NFZ0 1043 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 SNX29Q8TEQ0 813 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 IRF7Q92985 503 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 MCRS1Q96EZ8 462 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 ZNF512Q96ME7 567 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-226ENST00000591534 CDK15Q96Q40 435 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 ACO2Q99798 780 aaKnown RBP10.3□□□□□ -0.76
BRCA1-226ENST00000591534 GPR88Q9GZN0 384 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 CYP4F11Q9HBI6 524 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 ZFP14Q9HCL3 533 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 LTB4R2Q9NPC1 389 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 KMT5AQ9NQR1 393 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 DDX19AQ9NUU7 478 aaKnown RBP10.3□□□□□ -0.76
BRCA1-226ENST00000591534 ZSCAN32Q9NX65 697 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 MAP4K5Q9Y4K4 846 aa10.3□□□□□ -0.76
BRCA1-226ENST00000591534 PRR5-ARHGAP8B1AHC4 643 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 H0YCG3 227 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 TBC1D4O60343 1298 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 ABLIM3O94929 683 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 STAU1O95793 577 aaKnown RBP10.29□□□□□ -0.76
BRCA1-226ENST00000591534 GLULP15104 373 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 KCNE1P15382 129 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 NPTX2P47972 431 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 ARPP19P56211 112 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 PEX3P56589 373 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 ARHGAP8P85298 464 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 ROR1Q01973 937 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 CUL4AQ13619 759 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 KYAT1Q16773 422 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 XKR4Q5GH76 650 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 ZNF280DQ6N043 979 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 MPZL3Q6UWV2 235 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 ALKAL1Q6UXT8 129 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 DTHD1Q6ZMT9 781 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 ST13P5Q8NFI4 369 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-226ENST00000591534 TPCN2Q8NHX9 752 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 ING5Q8WYH8 240 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 E2F7Q96AV8 911 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 CLDN23Q96B33 292 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 RMDN1Q96DB5 314 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 TMX3Q96JJ7 454 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 MRGPRX2Q96LB1 330 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 CORO1BQ9BR76 489 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 KIFC3Q9BVG8 833 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 TRMT61BQ9BVS5 477 aaKnown RBP10.29□□□□□ -0.76
BRCA1-226ENST00000591534 BRD9Q9H8M2 597 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 HCFC1R1Q9NWW0 138 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 CHMP5Q9NZZ3 219 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 RAB23Q9ULC3 237 aa10.29□□□□□ -0.76
BRCA1-226ENST00000591534 C2orf16Q68DN1 1984 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 GOLGA6L22H0YM25 854 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 XPOTO43592 962 aaKnown RBP10.28□□□□□ -0.76
BRCA1-226ENST00000591534 HIP1RO75146 1068 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 TOM1L1O75674 476 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 SCP2P22307 547 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 MCM4P33991 863 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 SCNN1AP37088 669 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 BRCC3P46736 316 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 OSTNP61366 133 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 KCNA1Q09470 495 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 PLD1Q13393 1074 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 CTXN3Q4LDR2 81 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 SUMF1Q8NBK3 374 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms