RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 KPNA7A9QM74 516 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 ANHXE9PGG2 379 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 SPTLC1O15269 473 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 CYP11A1P05108 521 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 TMEM191BP0C7N4 346 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 SLFN14P0C7P3 912 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 SRFP11831 508 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 CMA1P23946 247 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 ALDH1A3P47895 512 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 NUBP1P53384 320 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 EPHB3P54753 998 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 TWF1Q12792 350 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 HTR4Q13639 388 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 DENND4AQ7Z401 1863 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 LEMD2Q8NC56 503 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 FLCNQ8NFG4 579 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 ANKRD36BP1Q96IX9 119 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 SCAND2PQ9GZW5 306 aaPredicted RBP13.36□□□□□ -0.27
SS18-225ENST00000585121 GDE1Q9NZC3 331 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 HSPBP1Q9NZL4 362 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 WNT16Q9UBV4 365 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 ITGA11Q9UKX5 1188 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 AGAP1Q9UPQ3 857 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 NUMBLQ9Y6R0 609 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 MUC6Q6W4X9 2439 aa13.36□□□□□ -0.27
SS18-225ENST00000585121 STK25O00506 426 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 NARSO43776 548 aaKnown RBP13.35□□□□□ -0.27
SS18-225ENST00000585121 PDGFBP01127 241 aaPredicted RBP13.35□□□□□ -0.27
SS18-225ENST00000585121 TNNC2P02585 160 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 ITGB3P05106 788 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 CFHP08603 1231 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 KRT19P08727 400 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 OR4Q2P0C623 313 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 POLR2BP30876 1174 aaKnown RBP13.35□□□□□ -0.27
SS18-225ENST00000585121 PTPN5P54829 565 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 RBP5P82980 135 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 EPM2AIP1Q7L775 607 aaPredicted RBP13.35□□□□□ -0.27
SS18-225ENST00000585121 SIX5Q8N196 739 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 CSGALNACT2Q8N6G5 542 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 GLIS3Q8NEA6 775 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 ZSWIM2Q8NEG5 633 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 ING5Q8WYH8 240 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 PGLYRP2Q96PD5 576 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 PDE11AQ9HCR9 933 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 ASAH2Q9NR71 780 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 CGNQ9P2M7 1197 aaKnown RBP13.35□□□□□ -0.27
SS18-225ENST00000585121 SERTAD1Q9UHV2 236 aa13.35□□□□□ -0.27
SS18-225ENST00000585121 A0A1B0GVL5 298 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 HUS1O60921 280 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 MICAL2O94851 1124 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 PFKFB1P16118 471 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 CLCN5P51795 746 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 SMARCB1Q12824 385 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 DUSP4Q13115 394 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 CUL4BQ13620 913 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 DUOXA2Q1HG44 320 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
SS18-225ENST00000585121 PARM1Q6UWI2 310 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 NPAS3Q8IXF0 933 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 NELFCDQ8IXH7 590 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 DCP1BQ8IZD4 617 aaKnown RBP13.34□□□□□ -0.27
SS18-225ENST00000585121 LRRC52Q8N7C0 313 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 CCDC47Q96A33 483 aaKnown RBP13.34□□□□□ -0.27
SS18-225ENST00000585121 MCRS1Q96EZ8 462 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 IRF2BPLQ9H1B7 796 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 SLC39A2Q9NP94 309 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 EXOC1Q9NV70 894 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 ZDHHC9Q9Y397 364 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 YIPF1Q9Y548 306 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 ASB3Q9Y575 518 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 PDCD11Q14690 1871 aaKnown RBP13.34□□□□□ -0.27
SS18-225ENST00000585121 MYL1P05976 194 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 CASP1P29466 404 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 SYKP43405 635 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 TUFMP49411 452 aaKnown RBP13.34□□□□□ -0.27
SS18-225ENST00000585121 VCPP55072 806 aaKnown RBP13.34□□□□□ -0.27
SS18-225ENST00000585121 TSPY1Q01534 308 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 BFSP1Q12934 665 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 MYO1EQ12965 1108 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 PSMD2Q13200 908 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 SLC39A12Q504Y0 691 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 WSCD1Q658N2 575 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 CENPPQ6IPU0 288 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 ITIH5Q86UX2 942 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 C1orf127Q8N9H9 656 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 ATAD1Q8NBU5 361 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 GOLGA5Q8TBA6 731 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 SCFD1Q8WVM8 642 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 FGF14Q92915 247 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 PAGE5Q96GU1 130 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 FNBP1Q96RU3 617 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 RTP3Q9BQQ7 232 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 ZCWPW1Q9H0M4 648 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 AGPAT3Q9NRZ7 376 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 HSFX1Q9UBD0 423 aa13.34□□□□□ -0.27
SS18-225ENST00000585121 MYH15Q9Y2K3 1946 aa13.33□□□□□ -0.27
SS18-225ENST00000585121 MTMR11A4FU01 709 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 CLIC2O15247 247 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 ACTN4O43707 911 aaKnown RBP13.33□□□□□ -0.28
SS18-225ENST00000585121 PRPF40AO75400 957 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms