RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 MRPL45Q9BRJ2 306 aaKnown RBP13.27□□□□□ -0.29
CDK5R1-202ENST00000584716 VN1R3Q9BXE9 311 aa13.27□□□□□ -0.29
CDK5R1-202ENST00000584716 SDCBP2Q9H190 292 aa13.27□□□□□ -0.29
CDK5R1-202ENST00000584716 VRTNQ9H8Y1 702 aa13.27□□□□□ -0.29
CDK5R1-202ENST00000584716 GDAP2Q9NXN4 497 aa13.27□□□□□ -0.29
CDK5R1-202ENST00000584716 APEX2Q9UBZ4 518 aa13.27□□□□□ -0.29
CDK5R1-202ENST00000584716 DNAJC12Q9UKB3 198 aa13.27□□□□□ -0.29
CDK5R1-202ENST00000584716 AJAP1Q9UKB5 411 aaPredicted RBP13.27□□□□□ -0.29
CDK5R1-202ENST00000584716 SF3B1O75533 1304 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDK5R1-202ENST00000584716 A0A1W2PQC6 194 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 CARNS1A5YM72 827 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 M0QZQ0 153 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 C2CD2LO14523 706 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 EPHB6O15197 1021 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 NOL4O94818 638 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 PBX1P40424 430 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 ASPAP45381 313 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 AARSP49588 968 aaKnown RBP eCLIP13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 MRE11P49959 708 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 POLR2FP61218 127 aaKnown RBP13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 ERVK-21P61565 698 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 CUL2Q13617 745 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 RAPGEF1Q13905 1077 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 IQCEQ6IPM2 695 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 TMC6Q7Z403 805 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 DDX53Q86TM3 631 aaKnown RBP13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 METTL23Q86XA0 190 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 DRC7Q8IY82 874 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 VPS52Q8N1B4 723 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 PDCL2Q8N4E4 241 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 FBXO22Q8NEZ5 403 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 OR6B3Q8NGW1 331 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 PLVAPQ9BX97 442 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 NIF3L1Q9GZT8 377 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 NLRC4Q9NPP4 1024 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 PLCB1Q9NQ66 1216 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 PCDHB8Q9UN66 801 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 L1RE1Q9UN81 338 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 FHOD1Q9Y613 1164 aa13.26□□□□□ -0.29
CDK5R1-202ENST00000584716 A0A1W2PPC1 479 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 RFXAPO00287 272 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 HCRTO43612 131 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 PDGFRBP09619 1106 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 UCHL3P15374 230 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 TRIM21P19474 475 aaKnown RBP13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 PAX3P23760 479 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 USP8P40818 1118 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 CDR1P51861 262 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 MFAP3P55082 362 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 PLCB3Q01970 1234 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 ELAVL2Q12926 359 aaKnown RBP13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 ORC1Q13415 861 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 GPM6BQ13491 265 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 USP41Q3LFD5 358 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 LRIT3Q3SXY7 679 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 ZNF394Q53GI3 561 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 KIAA1841Q6NSI8 718 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 PRSS55Q6UWB4 352 aaPredicted RBP13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 CACNA2D4Q7Z3S7 1137 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 OSTM1Q86WC4 334 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 GPIHBP1Q8IV16 184 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 VSTM4Q8IW00 320 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 ADGRF2Q8IZF7 708 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 TOP6BLQ8N6T0 577 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 SPPL3Q8TCT6 385 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 AUTS2Q8WXX7 1259 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 KREMEN1Q96MU8 473 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 SAMD11Q96NU1 681 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 TTPALQ9BTX7 342 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 BCO2Q9BYV7 579 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 GANQ9H2C0 597 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 SNX25Q9H3E2 840 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 PUF60Q9UHX1 559 aaKnown RBP13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 PCDHB4Q9Y5E5 795 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 VWA8A3KMH1 1905 aa13.25□□□□□ -0.29
CDK5R1-202ENST00000584716 C5orf67F2Z3F1 127 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 GRM6O15303 877 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 SOD2P04179 222 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 RB1P06400 928 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 PNMA6AP0CW24 399 aaPredicted RBP13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 FGFR3P22607 806 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 TBXAS1P24557 533 aaPredicted RBP13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 LMO2P25791 158 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 GNL1P36915 607 aaPredicted RBP13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 GCNT1Q02742 428 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 DRAP1Q14919 205 aaPredicted RBP13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 RTP2Q5QGT7 225 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 VARS2Q5ST30 1063 aaKnown RBP13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 SPECC1LQ69YQ0 1117 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 OVOS1Q6IE37 1185 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 DPH6Q7L8W6 267 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 TMC7Q7Z402 723 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 MICAL1Q8TDZ2 1067 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 POF1BQ8WVV4 589 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 KBTBD7Q8WVZ9 684 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 RIN2Q8WYP3 895 aaPredicted RBP13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 MRFAP1L1Q96HT8 127 aa13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 C11orf84Q9BUA3 381 aaPredicted RBP13.24□□□□□ -0.29
CDK5R1-202ENST00000584716 CYP3A43Q9HB55 503 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms