RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.77□□□□□ -0.05
SS18-222ENST00000582792 TIMM13Q9Y5L4 95 aaPredicted RBP14.77□□□□□ -0.05
SS18-222ENST00000582792 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.76□□□□□ -0.05
SS18-222ENST00000582792 MYBPHLA2RUH7 354 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 OR6C75A6NL08 312 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 SLC38A8A6NNN8 435 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 K7ELQ4 463 aaPredicted RBP14.76□□□□□ -0.05
SS18-222ENST00000582792 K7ESF4 209 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 CLDN3O15551 220 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 CXCL8P10145 99 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 MAPTP10636 758 aaKnown RBP14.76□□□□□ -0.05
SS18-222ENST00000582792 SOX9P48436 509 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 TOB1P50616 345 aaPredicted RBP14.76□□□□□ -0.05
SS18-222ENST00000582792 EPHB3P54753 998 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 DUSP4Q13115 394 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 GPR17Q13304 367 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 ZBTB6Q15916 424 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 CSRP2Q16527 193 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 PPM1JQ5JR12 505 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 WDR44Q5JSH3 913 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 PRR23CQ6ZRP0 262 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.76□□□□□ -0.05
SS18-222ENST00000582792 TMEM130Q8N3G9 435 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 INTS4Q96HW7 963 aaKnown RBP14.76□□□□□ -0.05
SS18-222ENST00000582792 MMTAG2Q9BU76 263 aaKnown RBP14.76□□□□□ -0.05
SS18-222ENST00000582792 MKNK1Q9BUB5 465 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 KCNG1Q9UIX4 513 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 KIF3AQ9Y496 699 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 PCDHB6Q9Y5E3 794 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.76□□□□□ -0.05
SS18-222ENST00000582792 MAP1BP46821 2468 aaKnown RBP14.76□□□□□ -0.05
SS18-222ENST00000582792 LAMA1P25391 3075 aa14.76□□□□□ -0.05
SS18-222ENST00000582792 CFAP47Q6ZTR5 3102 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 TTC26A0AVF1 554 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 SPECC1L-ADORA2AF8WAN1 911 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 LAD1O00515 517 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 CLTAP09496 248 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 PLS3P13797 630 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 CYP3A5P20815 502 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 U2AF2P26368 475 aaKnown RBP eCLIP14.75□□□□□ -0.051e-7■■■□□ 18.2
SS18-222ENST00000582792 CDC25AP30304 524 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 CTHP32929 405 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 PRPHP41219 470 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 ALDH1A3P47895 512 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 SMTNP53814 917 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 SPAG1Q07617 926 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 SRSF5Q13243 272 aaKnown RBP14.75□□□□□ -0.05
SS18-222ENST00000582792 IL17AQ16552 155 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 DGKKQ5KSL6 1271 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 STXBP5Q5T5C0 1151 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 CENPPQ6IPU0 288 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 TXNDC11Q6PKC3 985 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 Q6ZS52 159 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 USP37Q86T82 979 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 RALGPS2Q86X27 583 aaPredicted RBP14.75□□□□□ -0.05
SS18-222ENST00000582792 ARID3BQ8IVW6 561 aaPredicted RBP14.75□□□□□ -0.05
SS18-222ENST00000582792 KIF12Q96FN5 646 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 HAPLN2Q9GZV7 340 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 UBQLN1Q9UMX0 589 aaKnown RBP14.75□□□□□ -0.05
SS18-222ENST00000582792 ASB3Q9Y575 518 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 NUP210Q8TEM1 1887 aaPredicted RBP14.75□□□□□ -0.05
SS18-222ENST00000582792 USP24Q9UPU5 2620 aa14.75□□□□□ -0.05
SS18-222ENST00000582792 MYH11P35749 1972 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 ZFHX4Q86UP3 3567 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 MTMR11A4FU01 709 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 FOXD2O60548 495 aaPredicted RBP14.74□□□□□ -0.05
SS18-222ENST00000582792 HOXA6P31267 233 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 MATR3P43243 847 aaKnown RBP eCLIP14.74□□□□□ -0.05
SS18-222ENST00000582792 RAD51AP2Q09MP3 1159 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 MYBPC2Q14324 1141 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 ARHGAP29Q52LW3 1261 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 HEATR6Q6AI08 1181 aaKnown RBP14.74□□□□□ -0.05
SS18-222ENST00000582792 DSTYKQ6XUX3 929 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 DTHD1Q6ZMT9 781 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 GAREM2Q75VX8 874 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 GPIHBP1Q8IV16 184 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 HSCBQ8IWL3 235 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 FAM184AQ8NB25 1140 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 PSMG2Q969U7 264 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 LRRC3BQ96PB8 259 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 OBP2AQ9NY56 170 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 SLC27A5Q9Y2P5 690 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 RALGAPA1Q6GYQ0 2036 aa14.74□□□□□ -0.05
SS18-222ENST00000582792 CHD6Q8TD26 2715 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 DPYSL4O14531 572 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 XPOTO43592 962 aaKnown RBP14.73□□□□□ -0.05
SS18-222ENST00000582792 GDF9O60383 454 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 FGF19O95750 216 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 TYMPP19971 482 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 WEE1P30291 646 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 TNFSF9P41273 254 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 PPP2R3AQ06190 1150 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 CCINQ13939 588 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 HYIQ5T013 277 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 GPR158Q5T848 1215 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 OVOS1Q6IE37 1185 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 HAUS6Q7Z4H7 955 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 DNAJB7Q7Z6W7 309 aaPredicted RBP14.73□□□□□ -0.05
SS18-222ENST00000582792 WDR5BQ86VZ2 330 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 SYNPOQ8N3V7 929 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms