RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 IKBKBO14920 756 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 KINO60870 393 aaKnown RBP13.62□□□□□ -0.23
SNORD55-201ENST00000581525 CST3P01034 146 aaPredicted RBP13.62□□□□□ -0.23
SNORD55-201ENST00000581525 NR3C1P04150 777 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 ITGB3P05106 788 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 ODC1P11926 461 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 POLR2BP30876 1174 aaKnown RBP13.62□□□□□ -0.23
SNORD55-201ENST00000581525 GPR17Q13304 367 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 SV2CQ496J9 727 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 CTXN3Q4LDR2 81 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 TMC5Q6UXY8 1006 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 DSTYKQ6XUX3 929 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 GJD3Q8N144 294 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 FEZF2Q8TBJ5 459 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 ZNF560Q96MR9 790 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 RTP3Q9BQQ7 232 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 MTMR12Q9C0I1 747 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 POMKQ9H5K3 350 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 VRTNQ9H8Y1 702 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 AVENQ9NQS1 362 aaPredicted RBP13.62□□□□□ -0.23
SNORD55-201ENST00000581525 TSHZ2Q9NRE2 1034 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 HSFX1Q9UBD0 423 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 AFF4Q9UHB7 1163 aaKnown RBP13.62□□□□□ -0.23
SNORD55-201ENST00000581525 TCF20Q9UGU0 1960 aaKnown RBP13.62□□□□□ -0.23
SNORD55-201ENST00000581525 CYB561D2O14569 222 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 GABRDO14764 452 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 RFPL2O75678 378 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 C4BPAP04003 597 aaKnown RBP13.61□□□□□ -0.23
SNORD55-201ENST00000581525 TMEM191BP0C7N4 346 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 SPATA31D3P0C874 917 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 BMP6P22004 513 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 PPP1R2P41236 205 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 CASP4P49662 377 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 MORC3Q14149 939 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 C1orf220Q5T0J3 134 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 OVOS1Q6IE37 1185 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 SPATA31D4Q6ZUB0 917 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 CCDC149Q6ZUS6 474 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 GLYCTKQ8IVS8 523 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 FNBP1Q96RU3 617 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 MKNK1Q9BUB5 465 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 WDR6Q9NNW5 1121 aaKnown RBP13.61□□□□□ -0.23
SNORD55-201ENST00000581525 TIMM13Q9Y5L4 95 aaPredicted RBP13.61□□□□□ -0.23
SNORD55-201ENST00000581525 PLXNA3P51805 1871 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 SCN1AP35498 2009 aa13.61□□□□□ -0.23
SNORD55-201ENST00000581525 TRIOO75962 3097 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 LRRIQ3A6PVS8 624 aaPredicted RBP13.6□□□□□ -0.23
SNORD55-201ENST00000581525 AKAP3O75969 853 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 VNN2O95498 520 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 TNNC2P02585 160 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 RPL13P26373 211 aaKnown RBP13.6□□□□□ -0.23
SNORD55-201ENST00000581525 SMARCB1Q12824 385 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 ADAM9Q13443 819 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 LMBRD2Q68DH5 695 aaPredicted RBP13.6□□□□□ -0.23
SNORD55-201ENST00000581525 USP37Q86T82 979 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 ZDHHC14Q8IZN3 488 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 TMEM86AQ8N2M4 240 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 TOP6BLQ8N6T0 577 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 FAM84AQ96KN4 292 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 APOL5Q9BWW9 433 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 XYLT2Q9H1B5 865 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 LMBRD1Q9NUN5 540 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 CDH22Q9UJ99 828 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 MAN1B1Q9UKM7 699 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 MAPK8IP1Q9UQF2 711 aa13.6□□□□□ -0.23
SNORD55-201ENST00000581525 PPP1R3GB7ZBB8 358 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 PI4K2BG5E9Z4 385 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 SEC24AO95486 1093 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 C8AP07357 584 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 DLATP10515 647 aaKnown RBP13.59□□□□□ -0.23
SNORD55-201ENST00000581525 TNNI1P19237 187 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 NR2F2P24468 414 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 CCNE1P24864 410 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 ATICP31939 592 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 PSMC2P35998 433 aaKnown RBP13.59□□□□□ -0.23
SNORD55-201ENST00000581525 LRRC63Q05C16 580 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 MYO1EQ12965 1108 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 SOWAHAQ2M3V2 549 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 WSCD1Q658N2 575 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 RNF19BQ6ZMZ0 732 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 INTS8Q75QN2 995 aaKnown RBP13.59□□□□□ -0.23
SNORD55-201ENST00000581525 SMYD4Q8IYR2 804 aaPredicted RBP13.59□□□□□ -0.23
SNORD55-201ENST00000581525 PDCL2Q8N4E4 241 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 TRIML1Q8N9V2 468 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 ERCC4Q92889 916 aaPredicted RBP13.59□□□□□ -0.23
SNORD55-201ENST00000581525 DHTKD1Q96HY7 919 aaPredicted RBP13.59□□□□□ -0.23
SNORD55-201ENST00000581525 ACBD6Q9BR61 282 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 ZCWPW1Q9H0M4 648 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 KIAA1468Q9P260 1216 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 L1RE1Q9UN81 338 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 FRMD4BQ9Y2L6 1034 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 NR2E1Q9Y466 385 aa13.59□□□□□ -0.23
SNORD55-201ENST00000581525 HUS1O60921 280 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 TACC1O75410 805 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 WEE2P0C1S8 567 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.24
SNORD55-201ENST00000581525 LHX1P48742 406 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 PMS1P54277 932 aaKnown RBP13.58□□□□□ -0.24
SNORD55-201ENST00000581525 DLG4P78352 724 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 ZACNQ401N2 412 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms