RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 GDI1P31150 447 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 UBA7P41226 1012 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 TNFSF9P41273 254 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 VIPR2P41587 438 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 MATR3P43243 847 aaKnown RBP eCLIP11.52□□□□□ -0.573e-6■■■□□ 15.2
RFFL-209ENST00000581265 LIG4P49917 911 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 ZNF131P52739 623 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 CACNB1Q02641 598 aaPredicted RBP11.52□□□□□ -0.57
RFFL-209ENST00000581265 PPP2R3AQ06190 1150 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 SPEM2Q0P670 501 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 DUSP4Q13115 394 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 PLD1Q13393 1074 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 MYBPC2Q14324 1141 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 ENOX2Q16206 610 aaKnown RBP11.52□□□□□ -0.57
RFFL-209ENST00000581265 SPATA1Q5VX52 437 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 CENPPQ6IPU0 288 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 USP37Q86T82 979 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 CD302Q8IX05 232 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 TMEM130Q8N3G9 435 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 SHKBP1Q8TBC3 707 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 FAM3CQ92520 227 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 COL26A1Q96A83 441 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 BICD1Q96G01 975 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 TMX3Q96JJ7 454 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 REEP2Q9BRK0 252 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 IER2Q9BTL4 223 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 EPC1Q9H2F5 836 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 CHRDQ9H2X0 955 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 CRISPLD1Q9H336 500 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 RPF1Q9H9Y2 349 aaKnown RBP11.52□□□□□ -0.57
RFFL-209ENST00000581265 YIPF1Q9Y548 306 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 HEPACAM2A8MVW5 462 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 H3BQV1 296 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 ARNTLO00327 626 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 ZNF263O14978 683 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 HNRNPDLO14979 420 aaKnown RBP11.51□□□□□ -0.57
RFFL-209ENST00000581265 TRAK2O60296 914 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 TDGF1P13385 188 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 GJB2P29033 226 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 ABCD1P33897 745 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 EPHB3P54753 998 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 LILRA4P59901 499 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 FCHO2Q0JRZ9 810 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 TEAD2Q15562 447 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 OVOS1Q6IE37 1185 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 TSSK4Q6SA08 328 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 DSTYKQ6XUX3 929 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 GPBP1Q86WP2 473 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 TMC8Q8IU68 726 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 MYCT1Q8N699 235 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 LRRC15Q8TF66 581 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 DDX1Q92499 740 aaKnown RBP11.51□□□□□ -0.57
RFFL-209ENST00000581265 CALML4Q96GE6 196 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 PGLYRP2Q96PD5 576 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 DNAJC25Q9H1X3 360 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 LMAN1LQ9HAT1 526 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 PARVGQ9HBI0 331 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 BLOC1S4Q9NUP1 217 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 HSFX1Q9UBD0 423 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 CPSF3Q9UKF6 684 aaKnown RBP11.51□□□□□ -0.57
RFFL-209ENST00000581265 NDRG2Q9UN36 371 aaKnown RBP11.51□□□□□ -0.57
RFFL-209ENST00000581265 ASB3Q9Y575 518 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.51□□□□□ -0.57
RFFL-209ENST00000581265 PIAS3Q9Y6X2 628 aa11.51□□□□□ -0.57
RFFL-209ENST00000581265 MYH11P35749 1972 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 A0A1W2PRU2 124 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 ANO9A1A5B4 782 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 PIRO00625 290 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 PPEF2O14830 753 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 CHADO15335 359 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 FAM13AO94988 1023 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 OR4Q2P0C623 313 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 CHRNB1P11230 501 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 ALDH1A3P47895 512 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 GUCY2FP51841 1108 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 NRLP54845 237 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 GTF2BQ00403 316 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 PPP2R5DQ14738 602 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 LPAL2Q16609 132 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 IL31Q6EBC2 164 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 ARMCX5Q6P1M9 558 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 SLC39A4Q6P5W5 647 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 C1orf228Q6PIY5 440 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 GAREM2Q75VX8 874 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 DNAJB7Q7Z6W7 309 aaPredicted RBP11.5□□□□□ -0.57
RFFL-209ENST00000581265 ARID3BQ8IVW6 561 aaPredicted RBP11.5□□□□□ -0.57
RFFL-209ENST00000581265 ATAD1Q8NBU5 361 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 PSMG2Q969U7 264 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 RSPRY1Q96DX4 576 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 SENP8Q96LD8 212 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 FIZ1Q96SL8 496 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 MSTO1Q9BUK6 570 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 SLITRK6Q9H5Y7 841 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 ASB7Q9H672 318 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 PARD6AQ9NPB6 346 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 SLC27A5Q9Y2P5 690 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 DERAQ9Y315 318 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 PATJQ8NI35 1801 aa11.5□□□□□ -0.57
RFFL-209ENST00000581265 PDCD11Q14690 1871 aaKnown RBP11.5□□□□□ -0.57
RFFL-209ENST00000581265 MAP1BP46821 2468 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms