RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 LAIR1Q6GTX8 287 aa19.44■□□□□ 0.7
MKS1-209ENST00000580127 SPEM1Q8N4L4 309 aa19.44■□□□□ 0.7
MKS1-209ENST00000580127 MYCT1Q8N699 235 aa19.44■□□□□ 0.7
MKS1-209ENST00000580127 AK8Q96MA6 479 aa19.44■□□□□ 0.7
MKS1-209ENST00000580127 PGLYRP2Q96PD5 576 aa19.44■□□□□ 0.7
MKS1-209ENST00000580127 PLIN2Q99541 437 aa19.44■□□□□ 0.7
MKS1-209ENST00000580127 YIPF1Q9Y548 306 aa19.44■□□□□ 0.7
MKS1-209ENST00000580127 TIMM13Q9Y5L4 95 aaPredicted RBP19.44■□□□□ 0.7
MKS1-209ENST00000580127 GPR179Q6PRD1 2367 aa19.44■□□□□ 0.7
MKS1-209ENST00000580127 A0A1W2PRU2 124 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 LACTBL1A8MY62 500 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 OGTO15294 1046 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 FOXD2O60548 495 aaPredicted RBP19.43■□□□□ 0.7
MKS1-209ENST00000580127 KRT18P05783 430 aaKnown RBP19.43■□□□□ 0.7
MKS1-209ENST00000580127 ODC1P11926 461 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 SLC12A3P55017 1021 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 NCKAP1LP55160 1127 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 SPAG1Q07617 926 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 VEPH1Q14D04 833 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 ARHGAP29Q52LW3 1261 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 CENPPQ6IPU0 288 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 POTEHQ6S545 545 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 METTL23Q86XA0 190 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 SHKBP1Q8TBC3 707 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 FAM212AQ96EL1 285 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 RTKNQ9BST9 563 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 THG1LQ9NWX6 298 aaKnown RBP19.43■□□□□ 0.7
MKS1-209ENST00000580127 DSEQ9UL01 958 aa19.43■□□□□ 0.7
MKS1-209ENST00000580127 PDCD11Q14690 1871 aaKnown RBP19.43■□□□□ 0.7
MKS1-209ENST00000580127 FRYLO94915 3013 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 LRP3O75074 770 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 MOSPD3O75425 235 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 FAM13AO94988 1023 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 AARSP49588 968 aaKnown RBP eCLIP19.42■□□□□ 0.7
MKS1-209ENST00000580127 LILRA4P59901 499 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 PLCB2Q00722 1185 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 DNAJB7Q7Z6W7 309 aaPredicted RBP19.42■□□□□ 0.7
MKS1-209ENST00000580127 RALGPS2Q86X27 583 aaPredicted RBP19.42■□□□□ 0.7
MKS1-209ENST00000580127 ARID3BQ8IVW6 561 aaPredicted RBP19.42■□□□□ 0.7
MKS1-209ENST00000580127 ZNF687Q8N1G0 1237 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 THEM5Q8N1Q8 247 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 RASSF8Q8NHQ8 419 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 KCNN1Q92952 543 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 PNMA5Q96PV4 448 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 GCNAQ96QF7 691 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 MSTO1Q9BUK6 570 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 ATXN3LQ9H3M9 355 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 OBP2AQ9NY56 170 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 ZMYM5Q9UJ78 669 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 TBX20Q9UMR3 447 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 DERAQ9Y315 318 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 DCHS1Q96JQ0 3298 aa19.42■□□□□ 0.7
MKS1-209ENST00000580127 COL4A3Q01955 1670 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 SHISA7A6NL88 538 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 MEFVO15553 781 aaPredicted RBP19.41■□□□□ 0.7
MKS1-209ENST00000580127 RETP07949 1114 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 CHRNB1P11230 501 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 ATXN1P54253 815 aaKnown RBP19.41■□□□□ 0.7
MKS1-209ENST00000580127 FCHO2Q0JRZ9 810 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 SMARCB1Q12824 385 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 SIM2Q14190 667 aaPredicted RBP19.41■□□□□ 0.7
MKS1-209ENST00000580127 SPATA1Q5VX52 437 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 PRR23BQ6ZRT6 265 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 PSMG2Q969U7 264 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 SENP8Q96LD8 212 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 PARVGQ9HBI0 331 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 SLC27A5Q9Y2P5 690 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 DMXL1Q9Y485 3027 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 TICRRQ7Z2Z1 1910 aa19.41■□□□□ 0.7
MKS1-209ENST00000580127 BMP15O95972 392 aa19.4■□□□□ 0.7
MKS1-209ENST00000580127 OR4Q2P0C623 313 aa19.4■□□□□ 0.7
MKS1-209ENST00000580127 SLFN12LQ6IEE8 588 aa19.4■□□□□ 0.7
MKS1-209ENST00000580127 GPBP1Q86WP2 473 aa19.4■□□□□ 0.7
MKS1-209ENST00000580127 SYNPOQ8N3V7 929 aa19.4■□□□□ 0.7
MKS1-209ENST00000580127 LRRC3Q9BY71 257 aa19.4■□□□□ 0.7
MKS1-209ENST00000580127 ZHX3Q9H4I2 956 aa19.4■□□□□ 0.7
MKS1-209ENST00000580127 A0A0B4J269 797 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 NPHP3-ACAD11A0A0J9YXS1 232 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 K7ENM7 598 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 TRAK2O60296 914 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 TBCAO75347 108 aaKnown RBP19.39■□□□□ 0.69
MKS1-209ENST00000580127 PIGRP01833 764 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 ADRB2P07550 413 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 WEE1P30291 646 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 CDC25CP30307 473 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 TNFSF9P41273 254 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 AMPD2Q01433 879 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 DHX8Q14562 1220 aaKnown RBP19.39■□□□□ 0.69
MKS1-209ENST00000580127 TMEM132DQ14C87 1099 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 ENOX2Q16206 610 aaKnown RBP19.39■□□□□ 0.69
MKS1-209ENST00000580127 TMEM119Q4V9L6 283 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 ARSHQ5FYA8 562 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 GPR158Q5T848 1215 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 ATAD1Q8NBU5 361 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 C2orf15Q8WU43 125 aaKnown RBP19.39■□□□□ 0.69
MKS1-209ENST00000580127 ASB7Q9H672 318 aa19.39■□□□□ 0.69
MKS1-209ENST00000580127 MYBPHLA2RUH7 354 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 MTMR11A4FU01 709 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 SLC38A8A6NNN8 435 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 SPECC1L-ADORA2AF8WAN1 911 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms