RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 CYP3A5P20815 502 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 U2AF2P26368 475 aaKnown RBP eCLIP9.31□□□□□ -0.926e-7■■■□□ 14.9
CASC3-206ENST00000579238 HOXA6P31267 233 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 CTHP32929 405 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 PRPHP41219 470 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 SOX9P48436 509 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 TOB1P50616 345 aaPredicted RBP9.31□□□□□ -0.92
CASC3-206ENST00000579238 SMTNP53814 917 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 DMWDQ09019 674 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 GPR17Q13304 367 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 MYBPC2Q14324 1141 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 ZBTB6Q15916 424 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 ARHGAP29Q52LW3 1261 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 PPM1JQ5JR12 505 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 WDR44Q5JSH3 913 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 CENPPQ6IPU0 288 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 DSTYKQ6XUX3 929 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 KCNK18Q7Z418 384 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.31□□□□□ -0.92
CASC3-206ENST00000579238 RALGPS2Q86X27 583 aaPredicted RBP9.31□□□□□ -0.92
CASC3-206ENST00000579238 FAM184AQ8NB25 1140 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 FAM200AQ8TCP9 573 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 KIF12Q96FN5 646 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 MMTAG2Q9BU76 263 aaKnown RBP9.31□□□□□ -0.92
CASC3-206ENST00000579238 MKNK1Q9BUB5 465 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 CRISPLD1Q9H336 500 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 RBM12Q9NTZ6 932 aaKnown RBP9.31□□□□□ -0.92
CASC3-206ENST00000579238 OBP2AQ9NY56 170 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 UBQLN1Q9UMX0 589 aaKnown RBP9.31□□□□□ -0.92
CASC3-206ENST00000579238 PCDHB6Q9Y5E3 794 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 TIMM13Q9Y5L4 95 aaPredicted RBP9.31□□□□□ -0.92
CASC3-206ENST00000579238 ACACBO00763 2458 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 MTMR11A4FU01 709 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 H0YCG3 227 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 DPYSL4O14531 572 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 XPOTO43592 962 aaKnown RBP9.3□□□□□ -0.92
CASC3-206ENST00000579238 PAX3P23760 479 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 WEE1P30291 646 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 CDC25AP30304 524 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 MATR3P43243 847 aaKnown RBP eCLIP9.3□□□□□ -0.92
CASC3-206ENST00000579238 PLCB2Q00722 1185 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 PPP2R3AQ06190 1150 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 SPAG1Q07617 926 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 SRSF5Q13243 272 aaKnown RBP9.3□□□□□ -0.92
CASC3-206ENST00000579238 IL17AQ16552 155 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 KYAT1Q16773 422 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 ARHGAP15Q53QZ3 475 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 HYIQ5T013 277 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 STXBP5Q5T5C0 1151 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 GPR158Q5T848 1215 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 HEATR6Q6AI08 1181 aaKnown RBP9.3□□□□□ -0.92
CASC3-206ENST00000579238 OVOS1Q6IE37 1185 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 TXNDC11Q6PKC3 985 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 DTHD1Q6ZMT9 781 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 Q6ZS52 159 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 GAREM2Q75VX8 874 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 HAUS6Q7Z4H7 955 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 DNAJB7Q7Z6W7 309 aaPredicted RBP9.3□□□□□ -0.92
CASC3-206ENST00000579238 WDR5BQ86VZ2 330 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 TMEM130Q8N3G9 435 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 SYNPOQ8N3V7 929 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 KCTD17Q8N5Z5 321 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 SYT2Q8N9I0 419 aaPredicted RBP9.3□□□□□ -0.92
CASC3-206ENST00000579238 ATAD1Q8NBU5 361 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 DDX1Q92499 740 aaKnown RBP9.3□□□□□ -0.92
CASC3-206ENST00000579238 KCNN1Q92952 543 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 PSMG2Q969U7 264 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 LRRC3BQ96PB8 259 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 TSPAN18Q96SJ8 248 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 HAPLN2Q9GZV7 340 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 ATXN3LQ9H3M9 355 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 KCND2Q9NZV8 630 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 HSFX1Q9UBD0 423 aa9.3□□□□□ -0.92
CASC3-206ENST00000579238 PDCD11Q14690 1871 aaKnown RBP9.3□□□□□ -0.92
CASC3-206ENST00000579238 EPG5Q9HCE0 2579 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 LACTBL1A8MY62 500 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 GABRR2P28476 465 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 SLC12A3P55017 1021 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 LILRA4P59901 499 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 RAD51AP2Q09MP3 1159 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 CCINQ13939 588 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 PON2Q15165 354 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 ZRSR1Q15695 479 aaKnown RBP9.29□□□□□ -0.92
CASC3-206ENST00000579238 ST3GAL2Q16842 350 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 ARMCX5Q6P1M9 558 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 CEP68Q76N32 757 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 ITIH5Q86UX2 942 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 GPIHBP1Q8IV16 184 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 FAM160A2Q8N612 972 aaPredicted RBP9.29□□□□□ -0.92
CASC3-206ENST00000579238 TTC9BQ8N6N2 239 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 BPIFB1Q8TDL5 484 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 BICD1Q96G01 975 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 ZFYVE19Q96K21 471 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 ZSCAN31Q96LW9 406 aaPredicted RBP9.29□□□□□ -0.92
CASC3-206ENST00000579238 TASP1Q9H6P5 420 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 RPF1Q9H9Y2 349 aaKnown RBP9.29□□□□□ -0.92
CASC3-206ENST00000579238 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.29□□□□□ -0.92
CASC3-206ENST00000579238 C2orf42Q9NWW7 574 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 GTSE1Q9NYZ3 720 aa9.29□□□□□ -0.92
CASC3-206ENST00000579238 LARSQ9P2J5 1176 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms