RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 KIF26AQ9ULI4 1882 aaPredicted RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 GOLGA8AA7E2F4 631 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 GOLGA8BA8MQT2 603 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 C9orf172C9J069 976 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 FAM229AH3BQW9 127 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 INPPL1O15357 1258 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 MSH4O15457 936 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 TEX28O15482 410 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 PAX4O43316 350 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 OFD1O75665 1012 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 EFEMP2O95967 443 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 FOSP01100 380 aaPredicted RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 CYP3A4P08684 503 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 SPATA31D3P0C874 917 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 CALM1P0DP23 149 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 CALM2P0DP24 149 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 CALM3P0DP25 149 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 NME2P22392 152 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 GBP2P32456 591 aaPredicted RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 ALDH7A1P49419 539 aaKnown RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 POLGP54098 1239 aaPredicted RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 SETQ01105 290 aaPredicted RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 NRG1Q02297 640 aaPredicted RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 HTR4Q13639 388 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 LRRC14Q15048 493 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 NECTIN1Q15223 517 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 POU4F3Q15319 338 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 RSPO4Q2I0M5 234 aaPredicted RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 ADCK5Q3MIX3 580 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 MTERF2Q49AM1 385 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 PRR16Q569H4 304 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 NOMO2Q5JPE7 1267 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 UBXN11Q5T124 520 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 PLA2G4FQ68DD2 849 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 TWF2Q6IBS0 349 aaKnown RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 C15orf39Q6ZRI6 1047 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 SPATA31D4Q6ZUB0 917 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 OTOP3Q7RTS5 596 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 SKAP1Q86WV1 359 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 SMAP1Q8IYB5 467 aaPredicted RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 RNF168Q8IYW5 571 aaPredicted RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 SLC44A3Q8N4M1 653 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 SUMF1Q8NBK3 374 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 GALNT11Q8NCW6 608 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 PJA1Q8NG27 643 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 RUFY2Q8WXA3 655 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 ACSF2Q96CM8 615 aaPredicted RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 SCLT1Q96NL6 688 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 MTA3Q9BTC8 594 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 RPP25Q9BUL9 199 aaKnown RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 HERC2P3Q9BVR0 1158 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 BACH2Q9BYV9 841 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 MRPL18Q9H0U6 180 aaKnown RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 RWDD1Q9H446 243 aaPredicted RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 MINDY3Q9H8M7 445 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 ARHGEF3Q9NR81 526 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 METTL5Q9NRN9 209 aaKnown RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 FAM105AQ9NUU6 356 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 CACNG4Q9UBN1 327 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 CEP131Q9UPN4 1083 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 PRG3Q9Y2Y8 225 aaPredicted RBP4.43□□□□□ -1.7
PTPRM-206ENST00000578093 PCDHA10Q9Y5I2 948 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 NUMBLQ9Y6R0 609 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 LAMA5O15230 3695 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 RALGAPA1Q6GYQ0 2036 aa4.43□□□□□ -1.7
PTPRM-206ENST00000578093 LOC400499M0QZD8 3231 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 SMG1Q96Q15 3661 aaKnown RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 EML5Q05BV3 1969 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 IGKV6-21A0A0C4DH24 114 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 KLF18A0A0U1RQI7 1052 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 CCDC195A0A1B0GUA6 201 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 WDR64B1ANS9 1081 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 NRP1O14786 923 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 SCAMP3O14828 347 aaKnown RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 MAGEB2O15479 319 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 ZBTB43O43298 467 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 DEAF1O75398 565 aaPredicted RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 FBXO24O75426 580 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 TDP2O95551 362 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 POMCP01189 267 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 SOD2P04179 222 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 SRFP11831 508 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 CPA1P15085 419 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 KLRC2P26717 231 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 AK2P54819 239 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 NLRP12P59046 1061 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 NTHL1P78549 312 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 RNASELQ05823 741 aaKnown RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 PWP1Q13610 501 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 PUM1Q14671 1186 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 PFKFB3Q16875 520 aaPredicted RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 DUOXA2Q1HG44 320 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 MEI1Q5TIA1 1274 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 GLB1LQ6UWU2 654 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 B3GNT9Q6UX72 402 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 HS2ST1Q7LGA3 356 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 RHPN2Q8IUC4 686 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 RELL1Q8IUW5 271 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 C1orf210Q8IVY1 113 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 SULF2Q8IWU5 870 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms