RNA–Protein interactions for RNA: ENST00000577840.5

CUEDC1-207, Transcript of CUE domain containing 1, humanhuman

TSL 5 BASIC

Gene CUEDC1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-207ENST00000577840 FNDC1Q4ZHG4 1894 aaPredicted RBP16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 CARNS1A5YM72 827 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 FOXN3O00409 490 aaPredicted RBP16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 B3GAT3O94766 335 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 GFPT2O94808 682 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 DDHD2O94830 711 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 ALDH2P05091 517 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 COL9A1P20849 921 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 HNRNPH3P31942 346 aaKnown RBP16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 ASPAP45381 313 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 BPIFB4P59827 614 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 ARID5AQ03989 594 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 DSC1Q08554 894 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 KLHL30Q0D2K2 578 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 PAN2Q504Q3 1202 aaKnown RBP16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 HS1BP3Q53T59 392 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 TDRD12Q587J7 1177 aaKnown RBP16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 SPOUT1Q5T280 376 aaKnown RBP16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 SCARA3Q6AZY7 606 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 FAM117BQ6P1L5 589 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 CYP26C1Q6V0L0 522 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 ZNF280BQ86YH2 543 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 TMTC1Q8IUR5 882 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 COLGALT2Q8IYK4 626 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 TMEM130Q8N3G9 435 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 HERVK_113Q902F9 699 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 SLC9A7Q96T83 725 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 YME1L1Q96TA2 773 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 ZBED2Q9BTP6 218 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 COLEC11Q9BWP8 271 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 BCO2Q9BYV7 579 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 NRDE2Q9H7Z3 1164 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 CISHQ9NSE2 258 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 GDAP2Q9NXN4 497 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 SLC4A7Q9Y6M7 1214 aa16.51■□□□□ 0.23
CUEDC1-207ENST00000577840 SERPING1P05155 500 aa16.5■□□□□ 0.23
CUEDC1-207ENST00000577840 WEE2P0C1S8 567 aa16.5■□□□□ 0.23
CUEDC1-207ENST00000577840 CD58P19256 250 aa16.5■□□□□ 0.23
CUEDC1-207ENST00000577840 DPH6Q7L8W6 267 aa16.5■□□□□ 0.23
CUEDC1-207ENST00000577840 VPS36Q86VN1 386 aa16.5■□□□□ 0.23
CUEDC1-207ENST00000577840 CMTR2Q8IYT2 770 aaKnown RBP16.5■□□□□ 0.23
CUEDC1-207ENST00000577840 TOP6BLQ8N6T0 577 aa16.5■□□□□ 0.23
CUEDC1-207ENST00000577840 APPL2Q8NEU8 664 aa16.5■□□□□ 0.23
CUEDC1-207ENST00000577840 PHOSPHO2Q8TCD6 241 aa16.5■□□□□ 0.23
CUEDC1-207ENST00000577840 ARID3AQ99856 593 aa16.5■□□□□ 0.23
CUEDC1-207ENST00000577840 DEF6Q9H4E7 631 aa16.5■□□□□ 0.23
CUEDC1-207ENST00000577840 FAN1Q9Y2M0 1017 aa16.5■□□□□ 0.23
CUEDC1-207ENST00000577840 CYB561D2O14569 222 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 TRAPPC3O43617 180 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 FAM163BP0C2L3 166 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 EPHB4P54760 987 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 CDK17Q00537 523 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 PTK2Q05397 1052 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 BTG3Q14201 252 aaPredicted RBP16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 MEA1Q16626 185 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 TMEM270Q6UE05 265 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 METTL23Q86XA0 190 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 FAM71AQ8IYT1 594 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 ZNF689Q96CS4 500 aaPredicted RBP16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 SENP8Q96LD8 212 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 GPR88Q9GZN0 384 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 SNX25Q9H3E2 840 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 SMYD3Q9H7B4 428 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 CACNG4Q9UBN1 327 aa16.49■□□□□ 0.23
CUEDC1-207ENST00000577840 TMEM189-UBE2V1I3L0A0 370 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 SPTLC1O15269 473 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 TADA2AO75478 443 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 PNMA6AP0CW24 399 aaPredicted RBP16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 ODC1P11926 461 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 SKILP12757 684 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 CYLC1P35663 651 aaPredicted RBP16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 PRKCIP41743 596 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 RAP1GAPP47736 663 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 ALDH7A1P49419 539 aaKnown RBP16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 PDE6CP51160 858 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 CDH8P55286 799 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 FAM109BQ6ICB4 259 aaPredicted RBP16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 TMEM86AQ8N2M4 240 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 RBBP8NLQ8NC74 664 aaPredicted RBP16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 OR6B3Q8NGW1 331 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 RABGGTAQ92696 567 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 CCDC42Q96M95 316 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 PAAF1Q9BRP4 392 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 DNAJB4Q9UDY4 337 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 DSEQ9UL01 958 aa16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 BARX2Q9UMQ3 279 aaPredicted RBP16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 PRG3Q9Y2Y8 225 aaPredicted RBP16.48■□□□□ 0.23
CUEDC1-207ENST00000577840 SSU72P8A0A1W2PR75 194 aa16.47■□□□□ 0.23
CUEDC1-207ENST00000577840 NRP1O14786 923 aa16.47■□□□□ 0.23
CUEDC1-207ENST00000577840 CYP26A1O43174 497 aa16.47■□□□□ 0.23
CUEDC1-207ENST00000577840 ARHGAP6O43182 974 aa16.47■□□□□ 0.23
CUEDC1-207ENST00000577840 TACC1O75410 805 aa16.47■□□□□ 0.23
CUEDC1-207ENST00000577840 KIF4AO95239 1232 aa16.47■□□□□ 0.23
CUEDC1-207ENST00000577840 GJB5O95377 273 aa16.47■□□□□ 0.23
CUEDC1-207ENST00000577840 ATP2A2P16615 1042 aaKnown RBP16.47■□□□□ 0.23
CUEDC1-207ENST00000577840 LAG3P18627 525 aa16.47■□□□□ 0.23
CUEDC1-207ENST00000577840 ACO1P21399 889 aaKnown RBP16.47■□□□□ 0.23
CUEDC1-207ENST00000577840 FECHP22830 423 aa16.47■□□□□ 0.23
CUEDC1-207ENST00000577840 AARSP49588 968 aaKnown RBP eCLIP16.47■□□□□ 0.23
CUEDC1-207ENST00000577840 ELAVL2Q12926 359 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms