RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-223	ENST00000576932	GRIP2	Q9C0E4	1043 aa		10.22	□□□□□ -0.77
TOM1L1-223	ENST00000576932	ARRDC1-AS1	Q9H2J1	176 aa		10.22	□□□□□ -0.77
TOM1L1-223	ENST00000576932	C8orf33	Q9H7E9	229 aa	Predicted RBP	10.22	□□□□□ -0.77
TOM1L1-223	ENST00000576932	BRPF3	Q9ULD4	1205 aa		10.22	□□□□□ -0.77
TOM1L1-223	ENST00000576932	ZNF232	Q9UNY5	417 aa		10.22	□□□□□ -0.77
TOM1L1-223	ENST00000576932	VWA8	A3KMH1	1905 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	SDK1	Q7Z5N4	2213 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932		A0A1B0GUA9	196 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	SRRM3	A6NNA2	597 aa	Predicted RBP	10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	INO80B-WBP1	J3KQ70	363 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	ZNF263	O14978	683 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	ARF4	P18085	180 aa	Predicted RBP	10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	FGFR3	P22607	806 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	AKAP5	P24588	427 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	CCNE1	P24864	410 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	GDI1	P31150	447 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	CTSO	P43234	321 aa	Predicted RBP	10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	NPEPPS	P55786	919 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	EXOSC10	Q01780	885 aa	Known RBP	10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	TFDP1	Q14186	410 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	EMC2	Q15006	297 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	CREB3L3	Q68CJ9	461 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	VIT	Q6UXI7	678 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	TRIM46	Q7Z4K8	759 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	MFSD6L	Q8IWD5	586 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	C4orf19	Q8IY42	314 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	ETNPPL	Q8TBG4	499 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	GAB3	Q8WWW8	586 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	GATA6	Q92908	595 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	SMARCD2	Q92925	531 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	CPB2	Q96IY4	423 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	ZC3H10	Q96K80	434 aa	Known RBP	10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	PAAF1	Q9BRP4	392 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	LSG1	Q9H089	658 aa	Known RBP	10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	VPS45	Q9NRW7	570 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	HRH3	Q9Y5N1	445 aa		10.21	□□□□□ -0.77
TOM1L1-223	ENST00000576932	SETX	Q7Z333	2677 aa	Known RBP	10.21	□□□□□ -0.78
TOM1L1-223	ENST00000576932	TICRR	Q7Z2Z1	1910 aa		10.21	□□□□□ -0.78
TOM1L1-223	ENST00000576932	NBEA	Q8NFP9	2946 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	SERTM1	A2A2V5	107 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	WDR27	A2RRH5	827 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	PRPF3	O43395	683 aa	Known RBP	10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	PRMT3	O60678	531 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	LRG1	P02750	347 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	P4HB	P07237	508 aa	Known RBP	10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	RBM25	P49756	843 aa	Known RBP	10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	NOVA1	P51513	510 aa	Known RBP	10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	MBTD1	Q05BQ5	628 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	PPP2R5C	Q13362	524 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	NID2	Q14112	1375 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	RNF43	Q68DV7	783 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	HEATR6	Q6AI08	1181 aa	Known RBP	10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	SLC8B1	Q6J4K2	584 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	ANKS3	Q6ZW76	656 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	PDZD4	Q76G19	769 aa	Predicted RBP	10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	DHX32	Q7L7V1	743 aa	Known RBP	10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	OTUD6A	Q7L8S5	288 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	LEMD2	Q8NC56	503 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	ZNF461	Q8TAF7	563 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	RNF217	Q8TC41	542 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	TBCK	Q8TEA7	893 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	HASPIN	Q8TF76	798 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	RABGGTA	Q92696	567 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	GJA10	Q969M2	543 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	PARP2	Q9UGN5	583 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	CDY1	Q9Y6F8	540 aa		10.2	□□□□□ -0.78
TOM1L1-223	ENST00000576932	SMG1	Q96Q15	3661 aa	Known RBP	10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	KLF18	A0A0U1RQI7	1052 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	MYBPHL	A2RUH7	354 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	CASTOR2	A6NHX0	329 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	TAF4	O00268	1085 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	CHAD	O15335	359 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	RPP40	O75818	363 aa	Known RBP	10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	ABLIM3	O94929	683 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	STAU1	O95793	577 aa	Known RBP	10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	TH	P07101	528 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	ATF2	P15336	505 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	WEE1	P30291	646 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	YWHAB	P31946	246 aa	Known RBP	10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	ELF1	P32519	619 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	MPL	P40238	635 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	RING1	Q06587	406 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	ZNF252P-AS1	Q0IIN9	211 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	FCHO2	Q0JRZ9	810 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	TEAD4	Q15561	434 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	NAB2	Q15742	525 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	HIF1A	Q16665	826 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	CYP4A22	Q5TCH4	519 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	DAB2IP	Q5VWQ8	1189 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	RALGPS2	Q86X27	583 aa	Predicted RBP	10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	TCEAL8	Q8IYN2	117 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	C1orf216	Q8TAB5	229 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	CSGALNACT1	Q8TDX6	532 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	PRIMPOL	Q96LW4	560 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	GPR88	Q9GZN0	384 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	SH3GLB2	Q9NR46	395 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	KLK14	Q9P0G3	267 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	CACNG4	Q9UBN1	327 aa		10.19	□□□□□ -0.78
TOM1L1-223	ENST00000576932	FLNB	O75369	2602 aa	Known RBP	10.19	□□□□□ -0.78

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