RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 C2orf16Q68DN1 1984 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 ASH1LQ9NR48 2969 aaKnown RBP9.81□□□□□ -0.84
SMG6-218ENST00000575454 TMEM8BA6NDV4 472 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 RHOBTB1O94844 696 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 CTDNEP1O95476 244 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 OR52Z1P0C646 297 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 FDPSP14324 419 aaKnown RBP9.81□□□□□ -0.84
SMG6-218ENST00000575454 PROZP22891 400 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 CCT6AP40227 531 aaKnown RBP9.81□□□□□ -0.84
SMG6-218ENST00000575454 TUFMP49411 452 aaKnown RBP9.81□□□□□ -0.84
SMG6-218ENST00000575454 MCM2P49736 904 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 PEX3P56589 373 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 STRN3Q13033 797 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 DUSP4Q13115 394 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 COL9A2Q14055 689 aaPredicted RBP9.81□□□□□ -0.84
SMG6-218ENST00000575454 MYBPC2Q14324 1141 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 KARSQ15046 597 aaKnown RBP9.81□□□□□ -0.84
SMG6-218ENST00000575454 ELF2Q15723 593 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 KYAT1Q16773 422 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 DAB2IPQ5VWQ8 1189 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 RNF43Q68DV7 783 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 CENPPQ6IPU0 288 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 DNAJB7Q7Z6W7 309 aaPredicted RBP9.81□□□□□ -0.84
SMG6-218ENST00000575454 BPIFB1Q8TDL5 484 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 C18orf25Q96B23 403 aaPredicted RBP9.81□□□□□ -0.84
SMG6-218ENST00000575454 RSPRY1Q96DX4 576 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 TSPAN18Q96SJ8 248 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 TARS2Q9BW92 718 aaKnown RBP9.81□□□□□ -0.84
SMG6-218ENST00000575454 RAB34Q9BZG1 259 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 TASP1Q9H6P5 420 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 KMT5AQ9NQR1 393 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 GTSE1Q9NYZ3 720 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 DNM3Q9UQ16 869 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 DOCK8Q8NF50 2099 aa9.81□□□□□ -0.84
SMG6-218ENST00000575454 AKAP13Q12802 2813 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 TRDMT1O14717 391 aaKnown RBP9.8□□□□□ -0.84
SMG6-218ENST00000575454 XPOTO43592 962 aaKnown RBP9.8□□□□□ -0.84
SMG6-218ENST00000575454 EXTL3O43909 919 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 TOM1L1O75674 476 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 TYMPP19971 482 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 CYP3A5P20815 502 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 CDC25CP30307 473 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 LRPAP1P30533 357 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 MPLP40238 635 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 SMTNP53814 917 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 PDIA5Q14554 519 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 VEPH1Q14D04 833 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 FBXO43Q4G163 708 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 TMEM196Q5HYL7 178 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 GPR158Q5T848 1215 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 PSAPL1Q6NUJ1 521 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 DSTYKQ6XUX3 929 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 KBTBD6Q86V97 674 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 C11orf74Q86VG3 221 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 KDF1Q8NAX2 398 aaPredicted RBP9.8□□□□□ -0.84
SMG6-218ENST00000575454 CCDC26Q8TAB7 109 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 TTC8Q8TAM2 541 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 PGLYRP2Q96PD5 576 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 NTPCRQ9BSD7 190 aaKnown RBP9.8□□□□□ -0.84
SMG6-218ENST00000575454 TIPINQ9BVW5 301 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 C2orf42Q9NWW7 574 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 ARHGAP28Q9P2N2 729 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 LRWD1Q9UFC0 647 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 KIAA1024Q9UPX6 916 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 WDFY3Q8IZQ1 3526 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 FANCMQ8IYD8 2048 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 COL4A3Q01955 1670 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 NCANO14594 1321 aa9.8□□□□□ -0.84
SMG6-218ENST00000575454 SOBPA7XYQ1 873 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 WNT7AO00755 349 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 CLDN3O15551 220 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 CLTAP09496 248 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 HARSP12081 509 aaKnown RBP9.79□□□□□ -0.84
SMG6-218ENST00000575454 DRD1P21728 446 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 GABRR2P28476 465 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 AARSP49588 968 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMG6-218ENST00000575454 FXR2P51116 673 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMG6-218ENST00000575454 NOVA1P51513 510 aaKnown RBP9.79□□□□□ -0.84
SMG6-218ENST00000575454 SMARCB1Q12824 385 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 NOLC1Q14978 699 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMG6-218ENST00000575454 CCDC6Q16204 474 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 TAF12Q16514 161 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 SLC10A6Q3KNW5 377 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 PLK5Q496M5 336 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 WDR44Q5JSH3 913 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 OVOS1Q6IE37 1185 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 UNQ6494/PRO21346Q6UXR6 183 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 ZPBP2Q6X784 338 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 GAREM2Q75VX8 874 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 SPIRE2Q8WWL2 714 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 GTF3C6Q969F1 213 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 ZFYVE19Q96K21 471 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 LRRC3BQ96PB8 259 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 DNAJC25Q9H1X3 360 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 POLD4Q9HCU8 107 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 RXFP3Q9NSD7 469 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 UBQLN1Q9UMX0 589 aaKnown RBP9.79□□□□□ -0.84
SMG6-218ENST00000575454 SLC27A5Q9Y2P5 690 aa9.79□□□□□ -0.84
SMG6-218ENST00000575454 SMG1Q96Q15 3661 aaKnown RBP9.78□□□□□ -0.84
SMG6-218ENST00000575454 H0YCG3 227 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms