RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 OR4Q2P0C623 313 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 PNPLA4P41247 253 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 ARPP19P56211 112 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 STX17P56962 302 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 MYL6P60660 151 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 ROR1Q01973 937 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 CREMQ03060 361 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 YWHAHQ04917 246 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 SMAD4Q13485 552 aaKnown RBP9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 SMAD2Q15796 467 aaKnown RBP9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 SOWAHAQ2M3V2 549 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 ZACNQ401N2 412 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 SV2CQ496J9 727 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 CTXN3Q4LDR2 81 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 TJAP1Q5JTD0 557 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 KLHL10Q6JEL2 608 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 TMC5Q6UXY8 1006 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 SV2AQ7L0J3 742 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 LRRTM3Q86VH5 581 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 FAM186BQ8IYM0 893 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 KREMEN2Q8NCW0 462 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 OR10T2Q8NGX3 314 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 HDAC7Q8WUI4 952 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 NELFBQ8WX92 580 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 HPDLQ96IR7 371 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 MKNK1Q9BUB5 465 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 XYLT2Q9H1B5 865 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 NUP62CLQ9H1M0 184 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 CD320Q9NPF0 282 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 MAN1C1Q9NR34 630 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 FBXW11Q9UKB1 542 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 L1RE1Q9UN81 338 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 USP15Q9Y4E8 981 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 SNX9Q9Y5X1 595 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 PLXNA3P51805 1871 aa9.36□□□□□ -0.91
TRAPPC1-203ENST00000571739 MTCL1Q9Y4B5 1905 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 GABRDO14764 452 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 PSMA7O14818 248 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 HCRTO43612 131 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 ZMYND10O75800 440 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 STAU1O95793 577 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 TRIM49P0CI25 452 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 TRIM49CP0CI26 452 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 ATF2P15336 505 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 PPP1R2P41236 205 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 GCLMP48507 274 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 AP3M2P53677 418 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 LRRC63Q05C16 580 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 ENPEPQ07075 957 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 BFSP1Q12934 665 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 GPR17Q13304 367 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 STIM1Q13586 685 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 PUS10Q3MIT2 529 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 RARS2Q5T160 578 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 OVOS1Q6IE37 1185 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 ZNF280DQ6N043 979 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 FOXR2Q6PJQ5 311 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 RNF19BQ6ZMZ0 732 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 RBM43Q6ZSC3 357 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 INTS8Q75QN2 995 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 FILIP1Q7Z7B0 1213 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 GPR149Q86SP6 731 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 OSTM1Q86WC4 334 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 PDCL2Q8N4E4 241 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 ZNF707Q96C28 371 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 NECAB3Q96P71 396 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 TSG101Q99816 390 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 PLEKHA4Q9H4M7 779 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 NME7Q9Y5B8 376 aa9.35□□□□□ -0.91
TRAPPC1-203ENST00000571739 GOLGA6L22H0YM25 854 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 PHACTR2O75167 634 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 SRGAP2BP0DMP2 458 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 ODC1P11926 461 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 LMO2P25791 158 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 CDR1P51861 262 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 NLRP12P59046 1061 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 ITIH3Q06033 890 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 NCOA4Q13772 614 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 CBX2Q14781 532 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 UVSSAQ2YD98 709 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 WDR72Q3MJ13 1102 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 ATAT1Q5SQI0 421 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 DPH6Q7L8W6 267 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 USP37Q86T82 979 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 TOP6BLQ8N6T0 577 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 CMASQ8NFW8 434 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 TAS1R2Q8TE23 839 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 KBTBD7Q8WVZ9 684 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 ZNF560Q96MR9 790 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 SRRTQ9BXP5 876 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 COL25A1Q9BXS0 654 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 OXCT2Q9BYC2 517 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 PRKD2Q9BZL6 878 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 ZCWPW1Q9H0M4 648 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 CRISPLD1Q9H336 500 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 VRTNQ9H8Y1 702 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 SFXN1Q9H9B4 322 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 TMLHEQ9NVH6 421 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 DZANK1Q9NVP4 752 aa9.34□□□□□ -0.91
TRAPPC1-203ENST00000571739 TMEM63CQ9P1W3 806 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms