RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 GPSM3Q9Y4H4 160 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 PCDHB12Q9Y5F1 795 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 ATP6V1DQ9Y5K8 247 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 EVPLQ92817 2033 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 PLXNB2O15031 1838 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 SCN4AP35499 1836 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 A0A0G2JMZ2 1700 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 LRRC37A2A6NM11 1700 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 MYH10P35580 1976 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PLIN4Q96Q06 1357 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 ELP1O95163 1332 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 ZNF541Q9H0D2 1346 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 A0A087WV62 115 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 IGKV6D-41A0A0C4DH26 115 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PGPEP1LA6NFU8 196 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 B2RBV5 119 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 TCP10L2B9ZVM9 353 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 IRAK2O43187 625 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 RIPK2O43353 540 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 THAP12O43422 761 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 ADCY3O60266 1144 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 GREM1O60565 184 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 DIAPH2O60879 1101 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 NOL3O60936 208 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 URI1O94763 535 aaPredicted RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 ENDOD1O94919 500 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 GDF11O95390 407 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 DEXIO95424 95 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 MMP1P03956 469 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PDGFAP04085 211 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 HRGP04196 525 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 ITGB1P05556 798 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PSAPP07602 524 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 C6orf222P0C671 652 aaPredicted RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 ATP1A3P13637 1013 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PCSK2P16519 638 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 TMEM11P17152 192 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PAMP19021 973 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 ALAS2P22557 587 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 SFPQP23246 707 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMG6-208ENST00000570874 MC4RP32245 332 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 SOX6P35712 828 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 GMPRP36959 345 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 MTIF2P46199 727 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 POLD2P49005 469 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 BLVRAP53004 296 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 ARL4CP56559 192 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 RNASE9P60153 205 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 UBE2HP62256 183 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 FKBP1AP62942 108 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 GBE1Q04446 702 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 GRIN1Q05586 938 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 CXCL9Q07325 125 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 ADCY2Q08462 1091 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 KCNMA1Q12791 1236 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 KIF5AQ12840 1032 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 GRSF1Q12849 480 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMG6-208ENST00000570874 NEDD9Q14511 834 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 MBTPS1Q14703 1052 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 KCNB1Q14721 858 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 SART3Q15020 963 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 PTPAQ15257 358 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 CAMK4Q16566 473 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 KIAA0753Q2KHM9 967 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 SNAP47Q5SQN1 464 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 ZNF697Q5TEC3 545 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 SFMBT2Q5VUG0 894 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 METTL11BQ5VVY1 283 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 FBXW10Q5XX13 1052 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 HGSNATQ68CP4 663 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 TTBK2Q6IQ55 1244 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 RPUSD3Q6P087 351 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 FAM117BQ6P1L5 589 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 WDR73Q6P4I2 378 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 LRSAM1Q6UWE0 723 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 XKR5Q6UX68 686 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 B3GNT9Q6UX72 402 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 C6orf15Q6UXA7 325 aaPredicted RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 B4GALNT4Q76KP1 1039 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 DPP9Q86TI2 863 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 SPATA24Q86W54 205 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PPFIBP1Q86W92 1011 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 HEATR4Q86WZ0 1026 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 FAM178BQ8IXR5 827 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 EFCAB13Q8IY85 973 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 DIS3L2Q8IYB7 885 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 CMTR2Q8IYT2 770 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 SLC7A5P1Q8MH63 180 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 ZNF444Q8N0Y2 327 aaPredicted RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 CCDC33Q8N5R6 958 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 AADATQ8N5Z0 425 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 TRIML2Q8N7C3 387 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 RNF214Q8ND24 703 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 TRIM58Q8NG06 486 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 MOSPD2Q8NHP6 518 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 NEDD1Q8NHV4 660 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 ERMNQ8TAM6 284 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 SLC35G2Q8TBE7 412 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 SCG3Q8WXD2 468 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 EDEM1Q92611 657 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms