RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 PDGFDQ9GZP0 370 aaPredicted RBP16.28■□□□□ 0.2
SMG6-207ENST00000570756 IL1RAPL1Q9NZN1 696 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 F8W8V4 182 aa16.27■□□□□ 0.2
SMG6-207ENST00000570756 SMAPO00193 183 aa16.27■□□□□ 0.2
SMG6-207ENST00000570756 CHMP2AO43633 222 aa16.27■□□□□ 0.2
SMG6-207ENST00000570756 CREB3O43889 395 aa16.27■□□□□ 0.2
SMG6-207ENST00000570756 RPS6KA4O75676 772 aa16.27■□□□□ 0.2
SMG6-207ENST00000570756 LYNP07948 512 aa16.27■□□□□ 0.2
SMG6-207ENST00000570756 FGFR1P11362 822 aa16.27■□□□□ 0.2
SMG6-207ENST00000570756 SHMT1P34896 483 aa16.27■□□□□ 0.2
SMG6-207ENST00000570756 ZC3H12AQ5D1E8 599 aaKnown RBP16.27■□□□□ 0.2
SMG6-207ENST00000570756 RFWD2Q8NHY2 731 aa16.27■□□□□ 0.2
SMG6-207ENST00000570756 GPR101Q96P66 508 aaPredicted RBP16.27■□□□□ 0.2
SMG6-207ENST00000570756 TMEM117Q9H0C3 514 aa16.27■□□□□ 0.2
SMG6-207ENST00000570756 VPS11Q9H270 941 aa16.27■□□□□ 0.2
SMG6-207ENST00000570756 DAGLAQ9Y4D2 1042 aa16.27■□□□□ 0.2
SMG6-207ENST00000570756 C6orf229H3BNL8 230 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 ADSSP30520 456 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 BAG6P46379 1132 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 CDK16Q00536 496 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 PPP2R5CQ13362 524 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 NFIXQ14938 502 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 FBXO11Q86XK2 927 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 RHOT1Q8IXI2 618 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 CYP2W1Q8TAV3 490 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 NCSTNQ92542 709 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 SKA1Q96BD8 255 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 ALKBH8Q96BT7 664 aaKnown RBP16.27■□□□□ 0.19
SMG6-207ENST00000570756 OPTNQ96CV9 577 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 MAK16Q9BXY0 300 aaKnown RBP16.27■□□□□ 0.19
SMG6-207ENST00000570756 ASCC2Q9H1I8 757 aaPredicted RBP16.27■□□□□ 0.19
SMG6-207ENST00000570756 MANSC1Q9H8J5 431 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 KRT82Q9NSB4 513 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 KANSL3Q9P2N6 904 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 FETUBQ9UGM5 382 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 NARFQ9UHQ1 456 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 NUMBLQ9Y6R0 609 aa16.27■□□□□ 0.19
SMG6-207ENST00000570756 UBR3Q6ZT12 1888 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 A0A1B0GVG6 124 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 A0A1W2PPM1 405 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 ADRA1DP25100 572 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 GEMIN4P57678 1058 aaKnown RBP16.26■□□□□ 0.19
SMG6-207ENST00000570756 DSG1Q02413 1049 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 THOC5Q13769 683 aaKnown RBP16.26■□□□□ 0.19
SMG6-207ENST00000570756 MORF4L2Q15014 288 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 C1orf220Q5T0J3 134 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 C6orf163Q5TEZ5 329 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 CENPUQ71F23 418 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 WDR60Q8WVS4 1066 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 ACCSQ96QU6 501 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 TSSK1BQ9BXA7 367 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 SPATA16Q9BXB7 569 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 TAS2R1Q9NYW7 299 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 ARHGEF35A5YM69 484 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 ZBTB39O15060 712 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 TGDSO95455 350 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 UBTFL6P0CB48 400 aaPredicted RBP16.26■□□□□ 0.19
SMG6-207ENST00000570756 FDX1P10109 184 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 BMP3P12645 472 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 ADRA2BP18089 450 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 PGM1P36871 562 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 RANBP1P43487 201 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 PRELPP51888 382 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 OVGP1Q12889 678 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 WDR72Q3MJ13 1102 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 USH1GQ495M9 461 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 RC3H1Q5TC82 1133 aaKnown RBP16.26■□□□□ 0.19
SMG6-207ENST00000570756 SLFN13Q68D06 897 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 RINLQ6ZS11 566 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 ZBED8Q8IZ13 594 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 UPF1Q92900 1129 aaKnown RBP eCLIP16.26■□□□□ 0.192e-7■■■■□ 25.6
SMG6-207ENST00000570756 CCDC17Q96LX7 622 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 OLFM3Q96PB7 478 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 FAM118BQ9BPY3 351 aa16.26■□□□□ 0.19
SMG6-207ENST00000570756 ZNFX1Q9P2E3 1918 aaKnown RBP16.26■□□□□ 0.19
SMG6-207ENST00000570756 GREB1LQ9C091 1923 aaPredicted RBP16.25■□□□□ 0.19
SMG6-207ENST00000570756 ALOX15BO15296 676 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 HLA-DOAP06340 250 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 RARBP10826 455 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 SERPINB3P29508 390 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 PHBP35232 272 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 PIK3CAP42336 1068 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 RAP1GDS1P52306 607 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 CNPY1Q3B7I2 92 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 EFHC2Q5JST6 749 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 KATNAL2Q8IYT4 538 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.25■□□□□ 0.19
SMG6-207ENST00000570756 DDX1Q92499 740 aaKnown RBP16.25■□□□□ 0.19
SMG6-207ENST00000570756 NDNQ99608 321 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 ZCWPW1Q9H0M4 648 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 HSPBP1Q9NZL4 362 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 ZNF536O15090 1300 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 IGLV3-22A0A075B6J6 115 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 WDR91A4D1P6 747 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 MAGEC1O60732 1142 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 PSMD10O75832 226 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 UFL1O94874 794 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 PROSCO94903 275 aa16.25■□□□□ 0.19
SMG6-207ENST00000570756 MAPTP10636 758 aaKnown RBP16.25■□□□□ 0.19
SMG6-207ENST00000570756 CAPN12Q6ZSI9 719 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms