RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 GRSF1Q12849 480 aaKnown RBP eCLIP11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 KARSQ15046 597 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 COL28A1Q2UY09 1125 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 DCAF4L1Q3SXM0 396 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 XKR4Q5GH76 650 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 GPR158Q5T848 1215 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 ZNF280DQ6N043 979 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 ALKAL1Q6UXT8 129 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 TRIM22Q8IYM9 498 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 FBXL16Q8N461 479 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 DDX12PQ92771 950 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 SUSD3Q96L08 255 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 ZMAT2Q96NC0 199 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 PGLYRP2Q96PD5 576 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 BBC3Q96PG8 261 aaPredicted RBP11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 AGXT2Q9BYV1 514 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 EBF1Q9UH73 591 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 KCNJ14Q9UNX9 436 aa11.45□□□□□ -0.58
CTDNEP1-202ENST00000570380 CCDC194A0A1B0GVG4 234 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 DEXIO95424 95 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 DUSP4Q13115 394 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 PTPAQ15257 358 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 NT5DC1Q5TFE4 455 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 PMS2CLQ68D20 193 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 SLFN12Q8IYM2 578 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 CEP120Q8N960 986 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 MCPH1Q8NEM0 835 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 JAKMIP1Q96N16 626 aaKnown RBP11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 FAM83CQ9BQN1 747 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 ATXN3LQ9H3M9 355 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 HPS4Q9NQG7 708 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 GKN1Q9NS71 199 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 TPCN1Q9ULQ1 816 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 NUB1Q9Y5A7 615 aa11.44□□□□□ -0.58
CTDNEP1-202ENST00000570380 ACACAQ13085 2346 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 PTPRBP23467 1997 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 BAG4O95429 457 aaKnown RBP11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 APBB3O95704 486 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 OR4Q2P0C623 313 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 XRCC6P12956 609 aaKnown RBP eCLIP11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 ATP2B1P20020 1258 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 GABRR2P28476 465 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 WEE1P30291 646 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 RPL9P32969 192 aaKnown RBP11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 MCM2P49736 904 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 GALK1P51570 392 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 EPHB3P54753 998 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 EVCP57679 992 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 OSTNP61366 133 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 SIM1P81133 766 aaPredicted RBP11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 PLD1Q13393 1074 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 RUNX3Q13761 415 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 EARS2Q5JPH6 523 aaKnown RBP11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 ATF7IP2Q5U623 682 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 TRIM68Q6AZZ1 485 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 BLOC1S2Q6QNY1 142 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 PIK3AP1Q6ZUJ8 805 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 SYT13Q7L8C5 426 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 CYP2U1Q7Z449 544 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 DNAJB7Q7Z6W7 309 aaPredicted RBP11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 FAM177A1Q8N128 213 aaPredicted RBP11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 RPLP0P6Q8NHW5 317 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 C18orf25Q96B23 403 aaPredicted RBP11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 TBC1D32Q96NH3 1257 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 POLR3CQ9BUI4 534 aaPredicted RBP11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 SMG9Q9H0W8 520 aaKnown RBP11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 SLC32A1Q9H598 525 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 SLC38A7Q9NVC3 462 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 PCDHA12Q9UN75 941 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 PLXND1Q9Y4D7 1925 aa11.43□□□□□ -0.58
CTDNEP1-202ENST00000570380 KCNE1P15382 129 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 BCKDHBP21953 392 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 U2AF2P26368 475 aaKnown RBP eCLIP11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 MCM4P33991 863 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 GRM5P41594 1212 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 ALDH1A3P47895 512 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 DGKEP52429 567 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 YARSP54577 528 aaKnown RBP11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 SCAPQ12770 1279 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 DMC1Q14565 340 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 ARHGAP15Q53QZ3 475 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 NAIF1Q69YI7 327 aaPredicted RBP11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 PIP4P1Q86T03 277 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 CHCHD4Q8N4Q1 142 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 APPL2Q8NEU8 664 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 DEPTORQ8TB45 409 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 OXER1Q8TDS5 423 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 PIGKQ92643 395 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 EZH1Q92800 747 aaPredicted RBP11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 KCNB2Q92953 911 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 NAP1L4Q99733 375 aaKnown RBP11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 KIFC3Q9BVG8 833 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 EBF3Q9H4W6 596 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 TASP1Q9H6P5 420 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 THG1LQ9NWX6 298 aaKnown RBP11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 ANKFY1Q9P2R3 1169 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 SLC27A5Q9Y2P5 690 aa11.42□□□□□ -0.58
CTDNEP1-202ENST00000570380 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
CTDNEP1-202ENST00000570380 SOAT2O75908 522 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms