RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 OR10A2Q9H208 303 aa4.46□□□□□ -1.7
UBR1-211ENST00000569971 PNPLA8Q9NP80 782 aa4.46□□□□□ -1.7
UBR1-211ENST00000569971 SLAMF7Q9NQ25 335 aa4.46□□□□□ -1.7
UBR1-211ENST00000569971 SACM1LQ9NTJ5 587 aa4.46□□□□□ -1.7
UBR1-211ENST00000569971 GJB4Q9NTQ9 266 aa4.46□□□□□ -1.7
UBR1-211ENST00000569971 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.46□□□□□ -1.7
UBR1-211ENST00000569971 CAMSAP2Q08AD1 1489 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 NPEPPSL1A6NEC2 478 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 PRSS29PA6NIE9 313 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 CCER2I3L3R5 266 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 APOL1O14791 398 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 GRM6O15303 877 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 LAMTOR5O43504 91 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 SH3BP5O60239 455 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 FZD7O75084 574 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 FSHBP01225 129 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 JUNP05412 331 aaKnown RBP4.45□□□□□ -1.7
UBR1-211ENST00000569971 PARP1P09874 1014 aaKnown RBP4.45□□□□□ -1.7
UBR1-211ENST00000569971 VSIG10L2P0DP72 767 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 HARSP12081 509 aaKnown RBP4.45□□□□□ -1.7
UBR1-211ENST00000569971 ALOX15P16050 662 aaPredicted RBP4.45□□□□□ -1.7
UBR1-211ENST00000569971 EN2P19622 333 aaPredicted RBP4.45□□□□□ -1.7
UBR1-211ENST00000569971 CSF2RBP32927 897 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 CHKAP35790 457 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 ALDH1A3P47895 512 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 HMGA2P52926 109 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 ARFIP2P53365 341 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 SOX8P57073 446 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 APBA1Q02410 837 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 TNFAIP2Q03169 654 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 PMS2P11Q13670 270 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 USP10Q14694 798 aaKnown RBP4.45□□□□□ -1.7
UBR1-211ENST00000569971 AFMIDQ63HM1 303 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 KRT40Q6A162 431 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 GGT6Q6P531 493 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 ZNF572Q7Z3I7 529 aaPredicted RBP4.45□□□□□ -1.7
UBR1-211ENST00000569971 RALYLQ86SE5 291 aaKnown RBP4.45□□□□□ -1.7
UBR1-211ENST00000569971 ZNF354CQ86Y25 554 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 REXO1L1PQ8IX06 675 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 KBTBD2Q8IY47 623 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 SMAP1Q8IYB5 467 aaPredicted RBP4.45□□□□□ -1.7
UBR1-211ENST00000569971 NKAPQ8N5F7 415 aaKnown RBP4.45□□□□□ -1.7
UBR1-211ENST00000569971 CASKIN2Q8WXE0 1202 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 BRI3BPQ8WY22 251 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 LPPQ93052 612 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 CEP95Q96GE4 821 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 SUCLG2Q96I99 432 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 TRIM54Q9BYV2 358 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 SLC6A15Q9H2J7 730 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 COL20A1Q9P218 1284 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 NCDNQ9UBB6 729 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 CFDP1Q9UEE9 299 aaPredicted RBP4.45□□□□□ -1.7
UBR1-211ENST00000569971 PADI4Q9UM07 663 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 KIF14Q15058 1648 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 ABCC5O15440 1437 aa4.45□□□□□ -1.7
UBR1-211ENST00000569971 PLB1Q6P1J6 1458 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 ANKRD30AQ9BXX3 1397 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 KDM6BO15054 1643 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 A0A087WV62 115 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 TCRBV7S2A1N4TA0A589 114 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 NPHP1O15259 732 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 MTSS1O43312 755 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 B4GALT4O60513 344 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 MATN4O95460 622 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 RAP2AP10114 183 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 TECP42680 631 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 KCNJ5P48544 419 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 PIK3CGP48736 1102 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 HSPA7P48741 367 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 PPP2CBP62714 309 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 PPP2CAP67775 309 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 NOMO3P69849 1222 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 HTRA4P83105 476 aaPredicted RBP4.44□□□□□ -1.7
UBR1-211ENST00000569971 CREMQ03060 361 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 HGFACQ04756 655 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 SP140Q13342 867 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 ELF2Q15723 593 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 PDCD2Q16342 344 aaPredicted RBP4.44□□□□□ -1.7
UBR1-211ENST00000569971 ARL13BQ3SXY8 428 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 FAM47AQ5JRC9 791 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 DACT2Q5SW24 774 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 USP30Q70CQ3 517 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 PDZD4Q76G19 769 aaPredicted RBP4.44□□□□□ -1.7
UBR1-211ENST00000569971 PLXDC1Q8IUK5 500 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 CPXCR1Q8N123 301 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 ATP11CQ8NB49 1132 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 IL17RDQ8NFM7 739 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 DNERQ8NFT8 737 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 OR6B3Q8NGW1 331 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 KBTBD7Q8WVZ9 684 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 ARL8AQ96BM9 186 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 MSLNLQ96KJ4 702 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 SCLT1Q96NL6 688 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 GPHA2Q96T91 129 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 C11orf54Q9H0W9 315 aaPredicted RBP4.44□□□□□ -1.7
UBR1-211ENST00000569971 KCNH6Q9H252 994 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 SLITRK6Q9H5Y7 841 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 SIDT1Q9NXL6 827 aaKnown RBP4.44□□□□□ -1.7
UBR1-211ENST00000569971 MOCS1Q9NZB8 636 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 SLC23A1Q9UHI7 598 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms