RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 DSEQ9UL01 958 aa13.79□□□□□ -0.2
CDT1-203ENST00000569140 USP15Q9Y4E8 981 aaPredicted RBP13.79□□□□□ -0.2
CDT1-203ENST00000569140 BACE2Q9Y5Z0 518 aa13.79□□□□□ -0.2
CDT1-203ENST00000569140 GRXCR2A6NFK2 248 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 PRRG1O14668 218 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 MBD3O95983 291 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 OR4Q2P0C623 313 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 HOXB8P17481 243 aaPredicted RBP13.78□□□□□ -0.2
CDT1-203ENST00000569140 TYMPP19971 482 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 BMP6P22004 513 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 PIK3CAP42336 1068 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 AARSP49588 968 aaKnown RBP eCLIP13.78□□□□□ -0.2
CDT1-203ENST00000569140 AP3M2P53677 418 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 TNNC1P63316 161 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 FKBP3Q00688 224 aaKnown RBP13.78□□□□□ -0.2
CDT1-203ENST00000569140 ROR1Q01973 937 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 CCDC40Q4G0X9 1142 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 PPM1LQ5SGD2 360 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 TDRD10Q5VZ19 366 aaKnown RBP13.78□□□□□ -0.2
CDT1-203ENST00000569140 WSCD1Q658N2 575 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 SYCE2Q6PIF2 218 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 RSPO2Q6UXX9 243 aaPredicted RBP13.78□□□□□ -0.2
CDT1-203ENST00000569140 THEM5Q8N1Q8 247 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 SMRP1Q8NCR6 262 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 ADAMTS19Q8TE59 1207 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 ZNF516Q92618 1163 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 PIDD1Q9HB75 910 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 POLIQ9UNA4 740 aa13.78□□□□□ -0.2
CDT1-203ENST00000569140 CCDC195A0A1B0GUA6 201 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 OR6C75A6NL08 312 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 PPP1R3GB7ZBB8 358 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 MAPK13O15264 365 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 C8AP07357 584 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 SP100P23497 879 aaPredicted RBP13.77□□□□□ -0.21
CDT1-203ENST00000569140 SCN1AP35498 2009 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 TSC2P49815 1807 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 CDR1P51861 262 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 MYL6P60660 151 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 NCOA4Q13772 614 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 RAB33AQ14088 237 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 MRPL58Q14197 206 aaKnown RBP13.77□□□□□ -0.21
CDT1-203ENST00000569140 ZNF699Q32M78 642 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 CREBRFQ8IUR6 639 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 ADGRF2Q8IZF7 708 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 SLC7A14Q8TBB6 771 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 TMEM174Q8WUU8 243 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 SYAP1Q96A49 352 aaPredicted RBP13.77□□□□□ -0.21
CDT1-203ENST00000569140 PGLYRP2Q96PD5 576 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 MKNK1Q9BUB5 465 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 PLEKHA4Q9H4M7 779 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 CYP4F11Q9HBI6 524 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDT1-203ENST00000569140 NXF1Q9UBU9 619 aaKnown RBP13.77□□□□□ -0.21
CDT1-203ENST00000569140 CDH22Q9UJ99 828 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 FBXW11Q9UKB1 542 aa13.77□□□□□ -0.21
CDT1-203ENST00000569140 PRUNE2Q8WUY3 3088 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 WDR27A2RRH5 827 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 SLC16A3O15427 465 aaKnown RBP13.76□□□□□ -0.21
CDT1-203ENST00000569140 RFPL2O75678 378 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 OAZ2O95190 189 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 CST3P01034 146 aaPredicted RBP13.76□□□□□ -0.21
CDT1-203ENST00000569140 BMP1P13497 986 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 SSTR3P32745 418 aaPredicted RBP13.76□□□□□ -0.21
CDT1-203ENST00000569140 GCLMP48507 274 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 ITIH3Q06033 890 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 CBX2Q14781 532 aaPredicted RBP13.76□□□□□ -0.21
CDT1-203ENST00000569140 TPD52L1Q16890 204 aaPredicted RBP13.76□□□□□ -0.21
CDT1-203ENST00000569140 SLC8B1Q6J4K2 584 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 SCARA5Q6ZMJ2 495 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 CCDC149Q6ZUS6 474 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 PDCL2Q8N4E4 241 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 SMG7Q92540 1137 aaKnown RBP13.76□□□□□ -0.21
CDT1-203ENST00000569140 ELMO3Q96BJ8 720 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 RIPOR3Q96MK2 946 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 NECAB3Q96P71 396 aaPredicted RBP13.76□□□□□ -0.21
CDT1-203ENST00000569140 TMEM209Q96SK2 561 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 OXCT2Q9BYC2 517 aaPredicted RBP13.76□□□□□ -0.21
CDT1-203ENST00000569140 GZF1Q9H116 711 aaPredicted RBP13.76□□□□□ -0.21
CDT1-203ENST00000569140 ADAM7Q9H2U9 754 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 DACH1Q9UI36 760 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 L1RE1Q9UN81 338 aa13.76□□□□□ -0.21
CDT1-203ENST00000569140 TCF20Q9UGU0 1960 aaKnown RBP13.75□□□□□ -0.21
CDT1-203ENST00000569140 CCL16O15467 120 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 STX10O60499 249 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 ZMYND10O75800 440 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 LRG1P02750 347 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 C4BPAP04003 597 aaKnown RBP13.75□□□□□ -0.21
CDT1-203ENST00000569140 CYP11A1P05108 521 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 ACAT1P24752 427 aaKnown RBP13.75□□□□□ -0.21
CDT1-203ENST00000569140 MTHFRP42898 656 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 MYL7Q01449 175 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 TSPY1Q01534 308 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 ADCY1Q08828 1119 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 SMAD2Q15796 467 aaKnown RBP13.75□□□□□ -0.21
CDT1-203ENST00000569140 WDR72Q3MJ13 1102 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 SLC39A12Q504Y0 691 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 ATAT1Q5SQI0 421 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 TTI2Q6NXR4 508 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 LILRA6Q6PI73 481 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms