RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 ZBTB6Q15916 424 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 ARHGAP15Q53QZ3 475 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 DTHD1Q6ZMT9 781 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 PRR23CQ6ZRP0 262 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 ITIH5Q86UX2 942 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 TMC8Q8IU68 726 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 CCDC83Q8IWF9 413 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 ZBTB45Q96K62 511 aaPredicted RBP17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 LARSQ9P2J5 1176 aaKnown RBP17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 TUBGCP4Q9UGJ1 667 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 DUSP4Q13115 394 aa17.13■□□□□ 0.33
HERPUD1-215ENST00000568676 GAS6Q14393 721 aa17.13■□□□□ 0.33
HERPUD1-215ENST00000568676 PTPAQ15257 358 aa17.13■□□□□ 0.33
HERPUD1-215ENST00000568676 LPAL2Q16609 132 aa17.13■□□□□ 0.33
HERPUD1-215ENST00000568676 HYIQ5T013 277 aa17.13■□□□□ 0.33
HERPUD1-215ENST00000568676 CENPPQ6IPU0 288 aa17.13■□□□□ 0.33
HERPUD1-215ENST00000568676 ARID3BQ8IVW6 561 aaPredicted RBP17.13■□□□□ 0.33
HERPUD1-215ENST00000568676 PSMG2Q969U7 264 aa17.13■□□□□ 0.33
HERPUD1-215ENST00000568676 KIF12Q96FN5 646 aa17.13■□□□□ 0.33
HERPUD1-215ENST00000568676 ZSCAN31Q96LW9 406 aaPredicted RBP17.13■□□□□ 0.33
HERPUD1-215ENST00000568676 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.13■□□□□ 0.33
HERPUD1-215ENST00000568676 PDCD11Q14690 1871 aaKnown RBP17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 SFI1A8K8P3 1242 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 SPECC1L-ADORA2AF8WAN1 911 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 K7ESF4 209 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 HRO43593 1189 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 CXCL8P10145 99 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 CTHP32929 405 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 MATR3P43243 847 aaKnown RBP eCLIP17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 PPM1JQ5JR12 505 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 OVOS1Q6IE37 1185 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 ARMCX5Q6P1M9 558 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 DSTYKQ6XUX3 929 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 CD302Q8IX05 232 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 SYT2Q8N9I0 419 aaPredicted RBP17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 PGLYRP2Q96PD5 576 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 DNAJC25Q9H1X3 360 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 SH2B1Q9NRF2 756 aaPredicted RBP17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 NCANO14594 1321 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 CACNA1BQ00975 2339 aa17.12■□□□□ 0.33
HERPUD1-215ENST00000568676 CCDC163A0A0D9SF12 145 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 SLC38A8A6NNN8 435 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 CHURC1-FNTBB4DL54 471 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 VNN2O95498 520 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 ODC1P11926 461 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 ABCD1P33897 745 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 FNTBP49356 437 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 TUFMP49411 452 aaKnown RBP17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 TOB1P50616 345 aaPredicted RBP17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 NBR1Q14596 966 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 SEZ6Q53EL9 994 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 DNAJB7Q7Z6W7 309 aaPredicted RBP17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 WDR5BQ86VZ2 330 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 BICD1Q96G01 975 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 LOXL4Q96JB6 756 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 ATXN3LQ9H3M9 355 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 THG1LQ9NWX6 298 aaKnown RBP17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 PCDHB6Q9Y5E3 794 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 EPG5Q9HCE0 2579 aa17.11■□□□□ 0.33
HERPUD1-215ENST00000568676 MTMR11A4FU01 709 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 PP2D1A8MPX8 630 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 ADRB2P07550 413 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 CDC25CP30307 473 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 LIMK1P53667 647 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 NCKAP1LP55160 1127 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 SMARCB1Q12824 385 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 CCINQ13939 588 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 VEPH1Q14D04 833 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 CEP68Q76N32 757 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 KCNK18Q7Z418 384 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 BPIFB1Q8TDL5 484 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 RSPRY1Q96DX4 576 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 GCNAQ96QF7 691 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 MMTAG2Q9BU76 263 aaKnown RBP17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 CRISPLD1Q9H336 500 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 RPF1Q9H9Y2 349 aaKnown RBP17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 DSEQ9UL01 958 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 KIF3AQ9Y496 699 aa17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 TIMM13Q9Y5L4 95 aaPredicted RBP17.1■□□□□ 0.33
HERPUD1-215ENST00000568676 ACACBO00763 2458 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 OGTO15294 1046 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 SLC26A4O43511 780 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 ATG13O75143 517 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 OR4Q2P0C623 313 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 GABRR2P28476 465 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 CDC25AP30304 524 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 LIG4P49917 911 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 LILRA4P59901 499 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 RILPL1Q5EBL4 403 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 GPR158Q5T848 1215 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 SPATA1Q5VX52 437 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 GAREM2Q75VX8 874 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 C2orf15Q8WU43 125 aaKnown RBP17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 CDK5RAP3Q96JB5 506 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 MKNK1Q9BUB5 465 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 TASP1Q9H6P5 420 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 RBM12Q9NTZ6 932 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms