RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 LIG4P49917 911 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 TOB1P50616 345 aaPredicted RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 ARPP19P56211 112 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 TBX4P57082 545 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 ATP2C1P98194 919 aaPredicted RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 PFKPQ01813 784 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 PSMD2Q13200 908 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 DHX8Q14562 1220 aaKnown RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 NOLC1Q14978 699 aaKnown RBP eCLIP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 C8orf34Q49A92 452 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 CTXN3Q4LDR2 81 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 PABPC1LQ4VXU2 614 aaKnown RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 C4orf46Q504U0 113 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 CYP4A22Q5TCH4 519 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 EEF1DP3Q658K8 133 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 IQCEQ6IPM2 695 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 ALKAL1Q6UXT8 129 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 USP37Q86T82 979 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 MYCT1Q8N699 235 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 TMEM105Q8N8V8 129 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 SYT2Q8N9I0 419 aaPredicted RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 DTWD2Q8NBA8 298 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 ZNF461Q8TAF7 563 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 SLC7A14Q8TBB6 771 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 RSAD2Q8WXG1 361 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 NKD2Q969F2 451 aaPredicted RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 ZNF707Q96C28 371 aaPredicted RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 MRFAP1L1Q96HT8 127 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 SGSM3Q96HU1 749 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 TMX3Q96JJ7 454 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 AK8Q96MA6 479 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 ZNF512Q96ME7 567 aaPredicted RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 FRMD6Q96NE9 622 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 PPP1R10Q96QC0 940 aaKnown RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 MYADMQ96S97 322 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 TSPAN18Q96SJ8 248 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 PLIN2Q99541 437 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 RUSC1Q9BVN2 902 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 TARS2Q9BW92 718 aaKnown RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 OXCT2Q9BYC2 517 aaPredicted RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 CDT1Q9H211 546 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 SMOC2Q9H3U7 446 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 ZHX3Q9H4I2 956 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 PLEKHA5Q9HAU0 1116 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 IL21Q9HBE4 155 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 FAM86C1Q9NVL1 165 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 ARHGAP28Q9P2N2 729 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 ANKFY1Q9P2R3 1169 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 MTRRQ9UBK8 725 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 CACNG4Q9UBN1 327 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 VTI1BQ9UEU0 232 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 FBXW11Q9UKB1 542 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 KCNH3Q9ULD8 1083 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 CA14Q9ULX7 337 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 MAFFQ9ULX9 164 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 MRPS23Q9Y3D9 190 aaKnown RBP5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 BACE2Q9Y5Z0 518 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 CDY1Q9Y6F8 540 aa5.08□□□□□ -1.6
HERPUD1-213ENST00000568358 PIEZO1Q92508 2521 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 CACNA1IQ9P0X4 2223 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 PP2D1A8MPX8 630 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 ANHXE9PGG2 379 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 K7ELQ4 463 aaPredicted RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 SMAPO00193 183 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 HNRNPDLO14979 420 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 NARSO43776 548 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 N4BP1O75113 896 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 TBCAO75347 108 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 PAPLNO95428 1278 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 RHOP08100 348 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 POU2F2P09086 479 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 CLTAP09496 248 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 ATF2P15336 505 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 PAX3P23760 479 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 TKTP29401 623 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 GNA15P30679 374 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 LONP1P36776 959 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 TXLNAP40222 546 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 NBL1P41271 181 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 BRCC3P46736 316 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 PPP2R3AQ06190 1150 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 HTR4Q13639 388 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 ANGPT1Q15389 498 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 NAB2Q15742 525 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 IL17AQ16552 155 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 XKR4Q5GH76 650 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 SPECC1Q5M775 1068 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 HYIQ5T013 277 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 TPGS2Q68CL5 300 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 SLFN12LQ6IEE8 588 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 ZNF280DQ6N043 979 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 ZC3H14Q6PJT7 736 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 PARM1Q6UWI2 310 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 ZPBP2Q6X784 338 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 DSTYKQ6XUX3 929 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 Q6ZNB5 142 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 PDZD4Q76G19 769 aaPredicted RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 HAUS6Q7Z4H7 955 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 BRAPQ7Z569 592 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 GPBP1Q86WP2 473 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms