RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 MAPK6Q16659 721 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 SNX30Q5VWJ9 437 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 DRICH1Q6PGQ1 229 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-215ENST00000566843 LVRNQ6Q4G3 990 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 DSTYKQ6XUX3 929 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 UCMAQ8WVF2 138 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 NRG4Q8WWG1 115 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 DHX38Q92620 1227 aaKnown RBP16.57■□□□□ 0.24
COMMD4-215ENST00000566843 UPF1Q92900 1129 aaKnown RBP eCLIP16.57■□□□□ 0.247e-14■■■■■ 92.7
COMMD4-215ENST00000566843 ZNF577Q9BSK1 485 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 MAK16Q9BXY0 300 aaKnown RBP16.57■□□□□ 0.24
COMMD4-215ENST00000566843 PIDD1Q9HB75 910 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 ANKFY1Q9P2R3 1169 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 SMCHD1A6NHR9 2005 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 ANKRD31Q8N7Z5 1873 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 NRXN2Q9P2S2 1712 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 NFASCO94856 1347 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 A0A1W2PPM1 405 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 GSC2O15499 205 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 TROVE2P10155 538 aaKnown RBP eCLIP16.57■□□□□ 0.24
COMMD4-215ENST00000566843 SKIP12755 728 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 SCNN1DP51172 638 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 EFHC2Q5JST6 749 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 FAM118BQ9BPY3 351 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 NPHS2Q9NP85 383 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 PSMC3IPQ9P2W1 217 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-215ENST00000566843 FETUBQ9UGM5 382 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 PRR12Q9ULL5 1215 aa16.57■□□□□ 0.24
COMMD4-215ENST00000566843 LIASO43766 372 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 DNAJC6O75061 913 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 TAS2R40P59535 323 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 SLC34A1Q06495 639 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 TRAF1Q13077 416 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 RCN1Q15293 331 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 CCDC6Q16204 474 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 HAUS6Q7Z4H7 955 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 ZNF677Q86XU0 584 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 CBWD2Q8IUF1 395 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 FBXL13Q8NEE6 735 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 RNF217Q8TC41 542 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 SCG3Q8WXD2 468 aaKnown RBP16.56■□□□□ 0.24
COMMD4-215ENST00000566843 TEKT1Q969V4 418 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 ARL8BQ9NVJ2 186 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 RAB20Q9NX57 234 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 PI4KBQ9UBF8 816 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 SCOCQ9UIL1 159 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 GOLGA8IPA6NC78 632 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 GOLGA8JA6NMD2 632 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 RTN3O95197 1032 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-215ENST00000566843 ZBTB7AO95365 584 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 VIL1P09327 827 aaKnown RBP16.56■□□□□ 0.24
COMMD4-215ENST00000566843 GTF2H1P32780 548 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 FASTKD3Q14CZ7 662 aaKnown RBP16.56■□□□□ 0.24
COMMD4-215ENST00000566843 MORF4L2Q15014 288 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 SNRNP35Q16560 246 aaKnown RBP16.56■□□□□ 0.24
COMMD4-215ENST00000566843 ACSBG2Q5FVE4 666 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 ENOSF1Q7L5Y1 443 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 GSTA5Q7RTV2 222 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 TMC2Q8TDI7 906 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 TAS1R2Q8TE23 839 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 NSL1Q96IY1 281 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 IWS1Q96ST2 819 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 RIT2Q99578 217 aa16.56■□□□□ 0.24
COMMD4-215ENST00000566843 MMADHCQ9H3L0 296 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-215ENST00000566843 DDTLA6NHG4 134 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-215ENST00000566843 HAUS5O94927 633 aa16.55■□□□□ 0.24
COMMD4-215ENST00000566843 PSMG1O95456 288 aa16.55■□□□□ 0.24
COMMD4-215ENST00000566843 CYP1A1P04798 512 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-215ENST00000566843 POLR2MP0CAP2 368 aa16.55■□□□□ 0.24
COMMD4-215ENST00000566843 CHRNA5P30532 468 aa16.55■□□□□ 0.24
COMMD4-215ENST00000566843 GCNT1Q02742 428 aa16.55■□□□□ 0.24
COMMD4-215ENST00000566843 AP1B1Q10567 949 aa16.55■□□□□ 0.24
COMMD4-215ENST00000566843 ZRSR2Q15696 482 aaKnown RBP16.55■□□□□ 0.24
COMMD4-215ENST00000566843 EAPPQ56P03 285 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-215ENST00000566843 PPP1R15BQ5SWA1 713 aa16.55■□□□□ 0.24
COMMD4-215ENST00000566843 LRRC74BQ6ZQY2 392 aa16.55■□□□□ 0.24
COMMD4-215ENST00000566843 MON1BQ7L1V2 547 aa16.55■□□□□ 0.24
COMMD4-215ENST00000566843 GLIS1Q8NBF1 620 aa16.55■□□□□ 0.24
COMMD4-215ENST00000566843 RFWD2Q8NHY2 731 aa16.55■□□□□ 0.24
COMMD4-215ENST00000566843 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-215ENST00000566843 EHMT1Q9H9B1 1298 aa16.55■□□□□ 0.24
COMMD4-215ENST00000566843 ATP9AO75110 1047 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 KRT36O76013 467 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 CFBP00751 764 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 NPR1P16066 1061 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 RPS6KA3P51812 740 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 NCKAP1LP55160 1127 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 RCN2Q14257 317 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 KRT72Q14CN4 511 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 RNF220Q5VTB9 566 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 ALLCQ8N6M5 410 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 GATA6Q92908 595 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 TIPINQ9BVW5 301 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 VPS11Q9H270 941 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 SYNCQ9H7C4 482 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 VPS37BQ9H9H4 285 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 STX18Q9P2W9 335 aaKnown RBP16.54■□□□□ 0.24
COMMD4-215ENST00000566843 DRG1Q9Y295 367 aaKnown RBP16.54■□□□□ 0.24
COMMD4-215ENST00000566843 NDC80O14777 642 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 PPEF1O14829 653 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms