RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 GCKP35557 465 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 NPTX2P47972 431 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 SF3A3Q12874 501 aaKnown RBP eCLIP22.84■■□□□ 1.25
SPSB3-208ENST00000566339 TRIP13Q15645 432 aaPredicted RBP22.84■■□□□ 1.25
SPSB3-208ENST00000566339 XRRA1Q6P2D8 792 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 ACER1Q8TDN7 264 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 C10orf82Q8WW14 230 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 ERP27Q96DN0 273 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 NAF1Q96HR8 494 aaKnown RBP22.84■■□□□ 1.25
SPSB3-208ENST00000566339 C9orf72Q96LT7 481 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 MLXIPLQ9NP71 852 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 CYLDQ9NQC7 956 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 KMT5AQ9NQR1 393 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 TBK1Q9UHD2 729 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 CNTN6Q9UQ52 1028 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 DDX39AO00148 427 aaKnown RBP22.83■■□□□ 1.24
SPSB3-208ENST00000566339 GRIK3Q13003 919 aa22.83■■□□□ 1.24
SPSB3-208ENST00000566339 MTMR1Q13613 665 aa22.83■■□□□ 1.24
SPSB3-208ENST00000566339 P3H1Q32P28 736 aa22.83■■□□□ 1.24
SPSB3-208ENST00000566339 CENPUQ71F23 418 aa22.83■■□□□ 1.24
SPSB3-208ENST00000566339 GSTA5Q7RTV2 222 aa22.83■■□□□ 1.24
SPSB3-208ENST00000566339 ALLCQ8N6M5 410 aa22.83■■□□□ 1.24
SPSB3-208ENST00000566339 SAYSD1Q9NPB0 183 aa22.83■■□□□ 1.24
SPSB3-208ENST00000566339 PSMC3IPQ9P2W1 217 aaPredicted RBP22.83■■□□□ 1.24
SPSB3-208ENST00000566339 CCDC189A1A4V9 331 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 DENND3A2RUS2 1198 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 A6NHS1 94 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 TYROBPO43914 113 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 PAX7P23759 505 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 NFX1Q12986 1120 aaKnown RBP22.82■■□□□ 1.24
SPSB3-208ENST00000566339 PSMD6Q15008 389 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 TAF11Q15544 211 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 FAM102BQ5T8I3 360 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 FYB2Q5VWT5 728 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 CAPRIN2Q6IMN6 1127 aaKnown RBP22.82■■□□□ 1.24
SPSB3-208ENST00000566339 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.82■■□□□ 1.24
SPSB3-208ENST00000566339 ABRAQ8N0Z2 381 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 FAM151AQ8WW52 585 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 POMGNT1Q8WZA1 660 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 NKD2Q969F2 451 aaPredicted RBP22.82■■□□□ 1.24
SPSB3-208ENST00000566339 SAAL1Q96ER3 474 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 PARVAQ9NVD7 372 aa22.82■■□□□ 1.24
SPSB3-208ENST00000566339 A8MUI8 341 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 PEX11AO75192 247 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 NEBLO76041 1014 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 PTPN4P29074 926 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 PHBP35232 272 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 NOMO3P69849 1222 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 TAP1Q03518 808 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 MAMLD1Q13495 774 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 XKR9Q5GH70 373 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 EFHC2Q5JST6 749 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 CDCA2Q69YH5 1023 aaPredicted RBP22.81■■□□□ 1.24
SPSB3-208ENST00000566339 MIS18BP1Q6P0N0 1132 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 LMNTD2Q8IXW0 634 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 ARMC2Q8NEN0 867 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 FEZF2Q8TBJ5 459 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 PRMT6Q96LA8 375 aaPredicted RBP22.81■■□□□ 1.24
SPSB3-208ENST00000566339 CCPG1Q9ULG6 757 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 EFR3BQ9Y2G0 817 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 EXTL3O43909 919 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 TBXAS1P24557 533 aaPredicted RBP22.81■■□□□ 1.24
SPSB3-208ENST00000566339 ZACNQ401N2 412 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 MCPH1Q8NEM0 835 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 PCDH9Q9HC56 1237 aa22.81■■□□□ 1.24
SPSB3-208ENST00000566339 DNAJC17Q9NVM6 304 aaKnown RBP22.81■■□□□ 1.24
SPSB3-208ENST00000566339 DDX56Q9NY93 547 aaKnown RBP22.81■■□□□ 1.24
SPSB3-208ENST00000566339 TM9SF1O15321 606 aa22.8■■□□□ 1.24
SPSB3-208ENST00000566339 ITGAVP06756 1048 aa22.8■■□□□ 1.24
SPSB3-208ENST00000566339 TPBGLP0DKB5 382 aa22.8■■□□□ 1.24
SPSB3-208ENST00000566339 TROVE2P10155 538 aaKnown RBP eCLIP22.8■■□□□ 1.24
SPSB3-208ENST00000566339 MRPS35P82673 323 aaKnown RBP22.8■■□□□ 1.24
SPSB3-208ENST00000566339 HHATQ5VTY9 493 aa22.8■■□□□ 1.24
SPSB3-208ENST00000566339 SLC39A4Q6P5W5 647 aa22.8■■□□□ 1.24
SPSB3-208ENST00000566339 TTLL6Q8N841 843 aa22.8■■□□□ 1.24
SPSB3-208ENST00000566339 CLEC4DQ8WXI8 215 aa22.8■■□□□ 1.24
SPSB3-208ENST00000566339 SLC7A6OSQ96CW6 309 aaPredicted RBP22.8■■□□□ 1.24
SPSB3-208ENST00000566339 TRIM33Q9UPN9 1127 aa22.8■■□□□ 1.24
SPSB3-208ENST00000566339 ACADSP16219 412 aa22.79■■□□□ 1.24
SPSB3-208ENST00000566339 KRT15P19012 456 aa22.79■■□□□ 1.24
SPSB3-208ENST00000566339 ATP6V1C1P21283 382 aa22.79■■□□□ 1.24
SPSB3-208ENST00000566339 TAS2R40P59535 323 aa22.79■■□□□ 1.24
SPSB3-208ENST00000566339 DNAJC3Q13217 504 aa22.79■■□□□ 1.24
SPSB3-208ENST00000566339 TSNAXIP1Q2TAA8 658 aa22.79■■□□□ 1.24
SPSB3-208ENST00000566339 FKBP1CQ5VVH2 108 aa22.79■■□□□ 1.24
SPSB3-208ENST00000566339 FAM47EQ6ZV65 393 aa22.79■■□□□ 1.24
SPSB3-208ENST00000566339 FAM13CQ8NE31 585 aa22.79■■□□□ 1.24
SPSB3-208ENST00000566339 CPA5Q8WXQ8 436 aa22.79■■□□□ 1.24
SPSB3-208ENST00000566339 DCLRE1BQ9H816 532 aa22.79■■□□□ 1.24
SPSB3-208ENST00000566339 IL1BP01584 269 aa22.78■■□□□ 1.24
SPSB3-208ENST00000566339 ACO1P21399 889 aaKnown RBP22.78■■□□□ 1.24
SPSB3-208ENST00000566339 CAP2P40123 477 aa22.78■■□□□ 1.24
SPSB3-208ENST00000566339 VPS41P49754 854 aa22.78■■□□□ 1.24
SPSB3-208ENST00000566339 KLHL38Q2WGJ6 581 aa22.78■■□□□ 1.24
SPSB3-208ENST00000566339 RNASEH2BQ5TBB1 312 aaKnown RBP22.78■■□□□ 1.24
SPSB3-208ENST00000566339 CYP4F22Q6NT55 531 aa22.78■■□□□ 1.24
SPSB3-208ENST00000566339 SLITRK1Q96PX8 696 aa22.78■■□□□ 1.24
SPSB3-208ENST00000566339 TBC1D10AQ9BXI6 508 aa22.78■■□□□ 1.24
SPSB3-208ENST00000566339 HEMGNQ9BXL5 484 aa22.78■■□□□ 1.24
SPSB3-208ENST00000566339 VPS11Q9H270 941 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms