RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 UNC93AQ86WB7 457 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 TNS4Q8IZW8 715 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 MSANTD4Q8NCY6 345 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 TNIP3Q96KP6 325 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 ZFP42Q96MM3 310 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 ZMAT2Q96NC0 199 aaKnown RBP10.5□□□□□ -0.73
SF3B3-207ENST00000566095 SLC9A7Q96T83 725 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 PI4K2AQ9BTU6 479 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 OXCT2Q9BYC2 517 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-207ENST00000566095 BCO2Q9BYV7 579 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 PDCL3Q9H2J4 239 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 SNX25Q9H3E2 840 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 L2HGDHQ9H9P8 463 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 TUBGCP4Q9UGJ1 667 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 SIX4Q9UIU6 781 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 CNTN6Q9UQ52 1028 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 ANK1P16157 1881 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 TBKBP1A7MCY6 615 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 EPHB6O15197 1021 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 LRRN2O75325 713 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 TACC1O75410 805 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 B3GAT3O94766 335 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 CST3P01034 146 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-207ENST00000566095 POMCP01189 267 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 ALDH2P05091 517 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 PAEPP09466 180 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 PRLRP16471 622 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 LAG3P18627 525 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 PCSK1P29120 753 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 PPM1AP35813 382 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 ALDH7A1P49419 539 aaKnown RBP10.49□□□□□ -0.73
SF3B3-207ENST00000566095 KIF11P52732 1056 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 SLC8A3P57103 927 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 GPNMBQ14956 572 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 ARHGEF19Q8IW93 802 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 FAM71AQ8IYT1 594 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 CMTR2Q8IYT2 770 aaKnown RBP10.49□□□□□ -0.73
SF3B3-207ENST00000566095 THEM5Q8N1Q8 247 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 TRIM58Q8NG06 486 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 PHOSPHO2Q8TCD6 241 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 LINC01599Q8WXQ3 324 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 C18orf25Q96B23 403 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-207ENST00000566095 CHP1Q99653 195 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 SYT11Q9BT88 431 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 NT5C1AQ9BXI3 368 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 MIS12Q9H081 205 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 XYLT2Q9H1B5 865 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 BARX2Q9UMQ3 279 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-207ENST00000566095 RWDD3Q9Y3V2 267 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 SNX9Q9Y5X1 595 aa10.49□□□□□ -0.73
SF3B3-207ENST00000566095 PDCD11Q14690 1871 aaKnown RBP10.49□□□□□ -0.73
SF3B3-207ENST00000566095 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-207ENST00000566095 CASTOR2A6NHX0 329 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 TADA2AO75478 443 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 TNFAIP3P21580 790 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 ASPAP45381 313 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 OR1G1P47890 313 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 HADHBP55084 474 aaKnown RBP10.48□□□□□ -0.73
SF3B3-207ENST00000566095 LILRA4P59901 499 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 WDR5P61964 334 aaKnown RBP10.48□□□□□ -0.73
SF3B3-207ENST00000566095 ARID5AQ03989 594 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 MAPRE1Q15691 268 aaKnown RBP10.48□□□□□ -0.73
SF3B3-207ENST00000566095 NAB2Q15742 525 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 PTPN21Q16825 1174 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 UPP1Q16831 310 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 CLLU1OSQ5K130 101 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 SPOUT1Q5T280 376 aaKnown RBP10.48□□□□□ -0.73
SF3B3-207ENST00000566095 SPOPLQ6IQ16 392 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 TMEM270Q6UE05 265 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 SCARA5Q6ZMJ2 495 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 TOGARAM2Q6ZUX3 1019 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 RBBP8NLQ8NC74 664 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-207ENST00000566095 BADQ92934 168 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 TATDN2Q93075 761 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 TOP1MTQ969P6 601 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 TRIM11Q96F44 468 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 YME1L1Q96TA2 773 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 ZBED2Q9BTP6 218 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.48□□□□□ -0.73
SF3B3-207ENST00000566095 APOBEC3GQ9HC16 384 aaKnown RBP10.48□□□□□ -0.73
SF3B3-207ENST00000566095 CISHQ9NSE2 258 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 TBC1D13Q9NVG8 400 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 NENFQ9UMX5 172 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 FAN1Q9Y2M0 1017 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 SLC4A7Q9Y6M7 1214 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 SF3B1O75533 1304 aaKnown RBP eCLIP10.48□□□□□ -0.738e-6■■■■■ 107
SF3B3-207ENST00000566095 TTC3P53804 2025 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 MICAL3Q7RTP6 2002 aa10.48□□□□□ -0.73
SF3B3-207ENST00000566095 TDRD15B5MCY1 1934 aaKnown RBP10.47□□□□□ -0.73
SF3B3-207ENST00000566095 FOXN3O00409 490 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-207ENST00000566095 CYB561D2O14569 222 aa10.47□□□□□ -0.73
SF3B3-207ENST00000566095 SYN3O14994 580 aa10.47□□□□□ -0.73
SF3B3-207ENST00000566095 MEFVO15553 781 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-207ENST00000566095 DGKIO75912 1065 aa10.47□□□□□ -0.73
SF3B3-207ENST00000566095 LSM8O95777 96 aaKnown RBP10.47□□□□□ -0.73
SF3B3-207ENST00000566095 FGFR1P11362 822 aa10.47□□□□□ -0.73
SF3B3-207ENST00000566095 CD58P19256 250 aa10.47□□□□□ -0.73
SF3B3-207ENST00000566095 TYMPP19971 482 aa10.47□□□□□ -0.73
SF3B3-207ENST00000566095 WARSP23381 471 aaKnown RBP10.47□□□□□ -0.73
SF3B3-207ENST00000566095 GNA15P30679 374 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms