RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 KIF2BQ8N4N8 673 aa7.69□□□□□ -1.18
SMG1-210ENST00000565224 RBBP8NLQ8NC74 664 aaPredicted RBP7.69□□□□□ -1.18
SMG1-210ENST00000565224 NLGN2Q8NFZ4 835 aa7.69□□□□□ -1.18
SMG1-210ENST00000565224 STAMBPL1Q96FJ0 436 aa7.69□□□□□ -1.18
SMG1-210ENST00000565224 RBM41Q96IZ5 413 aaKnown RBP7.69□□□□□ -1.18
SMG1-210ENST00000565224 PITPNM3Q9BZ71 974 aa7.69□□□□□ -1.18
SMG1-210ENST00000565224 APOBEC3GQ9HC16 384 aaKnown RBP7.69□□□□□ -1.18
SMG1-210ENST00000565224 SAYSD1Q9NPB0 183 aa7.69□□□□□ -1.18
SMG1-210ENST00000565224 UBN1Q9NPG3 1134 aa7.69□□□□□ -1.18
SMG1-210ENST00000565224 CYP26B1Q9NR63 512 aa7.69□□□□□ -1.18
SMG1-210ENST00000565224 PARVAQ9NVD7 372 aa7.69□□□□□ -1.18
SMG1-210ENST00000565224 IP6K2Q9UHH9 426 aa7.69□□□□□ -1.18
SMG1-210ENST00000565224 KCNG1Q9UIX4 513 aa7.69□□□□□ -1.18
SMG1-210ENST00000565224 DNALI1O14645 258 aaPredicted RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 MAFGO15525 162 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 NR3C2P08235 984 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 KCNA2P16389 499 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 TBXAS1P24557 533 aaPredicted RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 GBP2P32456 591 aaPredicted RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 WNT7BP56706 349 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 WDR4P57081 412 aaKnown RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 PRKCEQ02156 737 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 MGAT5Q09328 741 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 BAATQ14032 418 aaPredicted RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 ACCSLQ4AC99 568 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 DRICH1Q6PGQ1 229 aaPredicted RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 TRABD2AQ86V40 505 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 ECHDC2Q86YB7 292 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 TDRPQ86YL5 185 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 FEZF2Q8TBJ5 459 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 FBF1Q8TES7 1133 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 AGAP11Q8TF27 550 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 SLC16A10Q8TF71 515 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 L3MBTL3Q96JM7 780 aaPredicted RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 SLITRK1Q96PX8 696 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 FHDC1Q9C0D6 1143 aaPredicted RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 AGO2Q9UKV8 859 aaKnown RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 STYXL1Q9Y6J8 313 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 PTPRJQ12913 1337 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 PSME4Q14997 1843 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 PI4K2BG5E9Z4 385 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 MAGEB2O15479 319 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 PRPF4O43172 522 aaKnown RBP eCLIP7.68□□□□□ -1.182e-7■■■□□ 16.3
SMG1-210ENST00000565224 TJP3O95049 919 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 ASMTLO95671 621 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 KRT1P04264 644 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 KRT16P08779 473 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 CCND1P24385 295 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 GCAP28676 217 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 SSTR3P32745 418 aaPredicted RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 MSH2P43246 934 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 ACOT2P49753 483 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 MCL1Q07820 350 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 MYO1EQ12965 1108 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 LRRC38Q5VT99 294 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 KAZNQ674X7 775 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 FAM47EQ6ZV65 393 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 CCDC60Q8IWA6 550 aaPredicted RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 RTKN2Q8IZC4 609 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 ALLCQ8N6M5 410 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 AGBL3Q8NEM8 1001 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 RSRC1Q96IZ7 334 aaKnown RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 PAIP2Q9BPZ3 127 aaKnown RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 TRABDQ9H4I3 376 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 JPH1Q9HDC5 661 aaPredicted RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 RNF146Q9NTX7 359 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 TXLNGQ9NUQ3 528 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 KLHL11Q9NVR0 708 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 RBAKQ9NYW8 714 aaPredicted RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 NOP53Q9NZM5 478 aaKnown RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 DNPEPQ9ULA0 475 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 SMG5Q9UPR3 1016 aaKnown RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 CNTN6Q9UQ52 1028 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 ZNF148Q9UQR1 794 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 C15orf41Q9Y2V0 281 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 STARD13Q9Y3M8 1113 aa7.68□□□□□ -1.18
SMG1-210ENST00000565224 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.68□□□□□ -1.18
SMG1-210ENST00000565224 VWA5AO00534 786 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 NDC80O14777 642 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 SPAG7O75391 227 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 UNC5CO95185 931 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 ANP32DO95626 131 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 KRT10P13645 584 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 PECAM1P16284 738 aaPredicted RBP7.67□□□□□ -1.18
SMG1-210ENST00000565224 ATF7P17544 494 aaPredicted RBP7.67□□□□□ -1.18
SMG1-210ENST00000565224 MMP8P22894 467 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 ARSEP51690 589 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 CLNS1AP54105 237 aaKnown RBP7.67□□□□□ -1.18
SMG1-210ENST00000565224 SLC18A1P54219 525 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 NOP14P78316 857 aaKnown RBP7.67□□□□□ -1.18
SMG1-210ENST00000565224 LACTBP83111 547 aaPredicted RBP7.67□□□□□ -1.18
SMG1-210ENST00000565224 SP4Q02446 784 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 GPS1Q13098 491 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 MTMR2Q13614 643 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 SPARCL1Q14515 664 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 EMC2Q15006 297 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 MORF4L2Q15014 288 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 SETDB1Q15047 1291 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 ATP13A4Q4VNC1 1196 aa7.67□□□□□ -1.18
SMG1-210ENST00000565224 XKR3Q5GH77 459 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms