RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ZNF653Q96CK0 615 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 PBKQ96KB5 322 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 OSBPL9Q96SU4 736 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 ERVK-5Q9HDB9 667 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 ACP6Q9NPH0 428 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 SLC38A7Q9NVC3 462 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 PUF60Q9UHX1 559 aaKnown RBP16.59■□□□□ 0.25
COMMD4-210ENST00000564587 AMFRQ9UKV5 643 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 PHF24Q9UPV7 400 aa16.59■□□□□ 0.25
COMMD4-210ENST00000564587 PDCD11Q14690 1871 aaKnown RBP16.59■□□□□ 0.25
COMMD4-210ENST00000564587 SMIM28A0A1B0GU29 152 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 WEE2P0C1S8 567 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 FAM163BP0C2L3 166 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 CD58P19256 250 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 C1QBPQ07021 282 aaKnown RBP16.58■□□□□ 0.24
COMMD4-210ENST00000564587 INCA1Q0VD86 236 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 NFX1Q12986 1120 aaKnown RBP16.58■□□□□ 0.24
COMMD4-210ENST00000564587 PAK2Q13177 524 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 STILQ15468 1287 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 FBXO47Q5MNV8 452 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 DAAM2Q86T65 1068 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 MCOLN2Q8IZK6 566 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 TMEM35BQ8NCS4 154 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 SMG8Q8ND04 991 aaKnown RBP16.58■□□□□ 0.24
COMMD4-210ENST00000564587 CAGE1Q8TC20 777 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 RABGGTAQ92696 567 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 SELENOOQ9BVL4 669 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 MCOLN1Q9GZU1 580 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.58■□□□□ 0.24
COMMD4-210ENST00000564587 STARD7Q9NQZ5 370 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 FAM105AQ9NUU6 356 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 BARX2Q9UMQ3 279 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-210ENST00000564587 PTCH2Q9Y6C5 1203 aa16.58■□□□□ 0.24
COMMD4-210ENST00000564587 TRIP11Q15643 1979 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 ZNF623O75123 536 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 CILPO75339 1184 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 KIF4AO95239 1232 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 CALB1P05937 261 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 TUBBP07437 444 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 CTSHP09668 335 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 ITGA4P13612 1032 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 CDH5P33151 784 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-210ENST00000564587 NOMO3P69849 1222 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 CLUL1Q15846 466 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 TRIM71Q2Q1W2 868 aaKnown RBP16.57■□□□□ 0.24
COMMD4-210ENST00000564587 CFAP221Q4G0U5 840 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 CCDC181Q5TID7 509 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 SCARA5Q6ZMJ2 495 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 RSRC2Q7L4I2 434 aaKnown RBP16.57■□□□□ 0.24
COMMD4-210ENST00000564587 ZNF572Q7Z3I7 529 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-210ENST00000564587 MRPL10Q7Z7H8 261 aaKnown RBP16.57■□□□□ 0.24
COMMD4-210ENST00000564587 MSANTD4Q8NCY6 345 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 ARHGEF26Q96DR7 871 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 ZMAT2Q96NC0 199 aaKnown RBP16.57■□□□□ 0.24
COMMD4-210ENST00000564587 RPS6KC1Q96S38 1066 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 APOL6Q9BWW8 343 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 LHX5Q9H2C1 402 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 MRPL47Q9HD33 250 aaKnown RBP16.57■□□□□ 0.24
COMMD4-210ENST00000564587 ABCB6Q9NP58 842 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 UBN1Q9NPG3 1134 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 CNOT8Q9UFF9 292 aaKnown RBP16.57■□□□□ 0.24
COMMD4-210ENST00000564587 POLIQ9UNA4 740 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 GIT1Q9Y2X7 761 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 HES2Q9Y543 173 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 SCINQ9Y6U3 715 aa16.57■□□□□ 0.24
COMMD4-210ENST00000564587 TNRC18O15417 2968 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-210ENST00000564587 A0A1W2PQ45 241 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-210ENST00000564587 A0A1W2PQY0 241 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 MIF4GDA9UHW6 222 aaKnown RBP16.56■□□□□ 0.24
COMMD4-210ENST00000564587 ARVCFO00192 962 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 PIRO00625 290 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 FTCDO95954 541 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 VDRP11473 427 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 PAX3P23760 479 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 AKAP5P24588 427 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 NAA35Q5VZE5 725 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 C9orf57Q5W0N0 161 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 UNC93AQ86WB7 457 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 GPR161Q8N6U8 529 aaKnown RBP16.56■□□□□ 0.24
COMMD4-210ENST00000564587 WNT8BQ93098 351 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 PGBD4Q96DM1 585 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 CYFIP2Q96F07 1278 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 TMEM176AQ96HP8 235 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 PADI3Q9ULW8 664 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 STXBP5LQ9Y2K9 1186 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 FRMPD3Q5JV73 1810 aa16.56■□□□□ 0.24
COMMD4-210ENST00000564587 DNM1LO00429 736 aa16.55■□□□□ 0.24
COMMD4-210ENST00000564587 BUB1BO60566 1050 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-210ENST00000564587 LRPAP1P30533 357 aa16.55■□□□□ 0.24
COMMD4-210ENST00000564587 RAD23BP54727 409 aa16.55■□□□□ 0.24
COMMD4-210ENST00000564587 SV2CQ496J9 727 aa16.55■□□□□ 0.24
COMMD4-210ENST00000564587 SCARA3Q6AZY7 606 aa16.55■□□□□ 0.24
COMMD4-210ENST00000564587 CCDC70Q6NSX1 233 aa16.55■□□□□ 0.24
COMMD4-210ENST00000564587 MON1BQ7L1V2 547 aa16.55■□□□□ 0.24
COMMD4-210ENST00000564587 DPH6Q7L8W6 267 aa16.55■□□□□ 0.24
COMMD4-210ENST00000564587 NT5DC3Q86UY8 548 aa16.55■□□□□ 0.24
COMMD4-210ENST00000564587 CREG2Q8IUH2 290 aa16.55■□□□□ 0.24
COMMD4-210ENST00000564587 ZNF564Q8TBZ8 553 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-210ENST00000564587 MMS19Q96T76 1030 aa16.55■□□□□ 0.24
COMMD4-210ENST00000564587 NUP85Q9BW27 656 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms