RNA–Protein interactions for RNA: ENST00000564470.1

ATP2A1-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 467 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-207ENST00000564470 PTCH2Q9Y6C5 1203 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 SCN9AQ15858 1988 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 SHTN1A0MZ66 631 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 FAM90A27PA6NNH2 459 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 GOLIM4O00461 696 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 CDC14BO60729 498 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 BAG4O95429 457 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 FOSP01100 380 aaPredicted RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 KRT18P05783 430 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 GJB1P08034 283 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 SRGAP2CP0DJJ0 459 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 HSPD1P10809 573 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 PTPN1P18031 435 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 KRT15P19012 456 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 ACO1P21399 889 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 RPS6KB1P23443 525 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 IGHMBP2P38935 993 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 ZNF280AP59817 542 aaPredicted RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 RPS8P62241 208 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 POU5F1Q01860 360 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 TOP3AQ13472 1001 aaPredicted RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 SERINC3Q13530 473 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 FHL2Q14192 279 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 GPR19Q15760 415 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 RNF151Q2KHN1 245 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 ADCK5Q3MIX3 580 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 ZMAT1Q5H9K5 638 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 TTC39AQ5SRH9 613 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 RNF207Q6ZRF8 634 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 GET4Q7L5D6 327 aaPredicted RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 TDHQ8IZJ6 230 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 PAF1Q8N7H5 531 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 RAET1EQ8TD07 263 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 IPO4Q8TEX9 1081 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 PPM1EQ8WY54 764 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 APPBP2Q92624 585 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 CHMP4CQ96CF2 233 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 JAKMIP1Q96N16 626 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 GBP4Q96PP9 640 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 NEK1Q96PY6 1258 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 SRPK1Q96SB4 655 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 MPHOSPH8Q99549 860 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 CDC6Q99741 560 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 SPATA9Q9BWV2 254 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 UPF3BQ9BZI7 483 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 ZHX3Q9H4I2 956 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 ZCCHC17Q9NP64 241 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 CHST12Q9NRB3 414 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 CNNM1Q9NRU3 951 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 HOMER2Q9NSB8 354 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 MTMR10Q9NXD2 777 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 ANAPC4Q9UJX5 808 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 NR2E1Q9Y466 385 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 PCDHA8Q9Y5H6 950 aa4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 MKI67P46013 3256 aaKnown RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 RPAP1Q9BWH6 1393 aaPredicted RBP4.38□□□□□ -1.71
ATP2A1-207ENST00000564470 OTOFQ9HC10 1997 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 CYP21A2P08686 494 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 SLC5A1P13866 664 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 CASTP20810 708 aaKnown RBP4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 ADD2P35612 726 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 MCAMP43121 646 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 KCNQ1P51787 676 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 AK2P54819 239 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 BRD3Q15059 726 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 PPP2R5AQ15172 486 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 MAPRE1Q15691 268 aaKnown RBP4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 SUPT20HL1Q3ZLR7 823 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 FAM109BQ6ICB4 259 aaPredicted RBP4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 BLOC1S2Q6QNY1 142 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 DLK2Q6UY11 383 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 C15orf52Q6ZUT6 534 aaKnown RBP4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 PTRH1Q86Y79 214 aaKnown RBP4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 SCUBE1Q8IWY4 988 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 ZGPATQ8N5A5 531 aaKnown RBP4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 WDR48Q8TAF3 677 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 EDAQ92838 391 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 FBXW5Q969U6 566 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 ZNF503Q96F45 646 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 WNK4Q96J92 1243 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 OR14A2Q96R54 314 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 STRBPQ96SI9 672 aaKnown RBP4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 SEC62Q99442 399 aaKnown RBP4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 DPYSL5Q9BPU6 564 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 TRIM55Q9BYV6 548 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 ANKRD2Q9GZV1 360 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 FANCLQ9NW38 375 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 OAZ3Q9UMX2 235 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 FRMD4BQ9Y2L6 1034 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 ATP23Q9Y6H3 246 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 ZNF804BA4D1E1 1349 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 PDS5AQ29RF7 1337 aaKnown RBP4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 WDR19Q8NEZ3 1342 aa4.37□□□□□ -1.71
ATP2A1-207ENST00000564470 SSC5DA1L4H1 1573 aa4.36□□□□□ -1.71
ATP2A1-207ENST00000564470 AQP7O14520 342 aa4.36□□□□□ -1.71
ATP2A1-207ENST00000564470 FOXP2O15409 715 aa4.36□□□□□ -1.71
ATP2A1-207ENST00000564470 PFKFB2O60825 505 aa4.36□□□□□ -1.71
ATP2A1-207ENST00000564470 HMGCRP04035 888 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms