RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 RRAGAQ7L523 313 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 ZNF280BQ86YH2 543 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 CMTR2Q8IYT2 770 aaKnown RBP13.84□□□□□ -0.19
SPG7-209ENST00000564047 KREMEN1Q96MU8 473 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 SLC9A7Q96T83 725 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 TMEM175Q9BSA9 504 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 C1QTNF1Q9BXJ1 281 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 NRDE2Q9H7Z3 1164 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 RC3H2Q9HBD1 1191 aaKnown RBP13.84□□□□□ -0.19
SPG7-209ENST00000564047 SPTLC3Q9NUV7 552 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 GDAP2Q9NXN4 497 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 AJAP1Q9UKB5 411 aaPredicted RBP13.84□□□□□ -0.19
SPG7-209ENST00000564047 SLC4A7Q9Y6M7 1214 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 TTC3P53804 2025 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 MICAL3Q7RTP6 2002 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 KPNA7A9QM74 516 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 TMEM189-UBE2V1I3L0A0 370 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 ASPAP45381 313 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 JAM2P57087 298 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 LILRA4P59901 499 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 TNNC1P63316 161 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 RAPGEF1Q13905 1077 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 DRAP1Q14919 205 aaPredicted RBP13.83□□□□□ -0.2
SPG7-209ENST00000564047 PDXDC1Q6P996 788 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 CCDC186Q7Z3E2 898 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 FMNL3Q8IVF7 1028 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 TC2NQ8N9U0 490 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 OR8K1Q8NGG5 319 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 SYN2Q92777 582 aaPredicted RBP13.83□□□□□ -0.2
SPG7-209ENST00000564047 KAT5Q92993 513 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 ELMO3Q96BJ8 720 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 SPAG5Q96R06 1193 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 PAAF1Q9BRP4 392 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 BCO2Q9BYV7 579 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 FAM124BQ9H5Z6 455 aaPredicted RBP13.83□□□□□ -0.2
SPG7-209ENST00000564047 CYP3A43Q9HB55 503 aa13.83□□□□□ -0.2
SPG7-209ENST00000564047 CXXC1Q9P0U4 656 aaPredicted RBP13.83□□□□□ -0.2
SPG7-209ENST00000564047 NXF1Q9UBU9 619 aaKnown RBP13.83□□□□□ -0.2
SPG7-209ENST00000564047 PDCD11Q14690 1871 aaKnown RBP13.82□□□□□ -0.2
SPG7-209ENST00000564047 LRRC53A6NM62 1247 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 F8VZ95 297 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 SPTLC1O15269 473 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 B4GALT3O60512 393 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 B3GAT3O94766 335 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 GJB5O95377 273 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 ALDH2P05091 517 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 FAM163BP0C2L3 166 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 STAT1P42224 750 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 OR1G1P47890 313 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 AARSP49588 968 aaKnown RBP eCLIP13.82□□□□□ -0.2
SPG7-209ENST00000564047 ADKP55263 362 aaKnown RBP13.82□□□□□ -0.2
SPG7-209ENST00000564047 YWHAEP62258 255 aaKnown RBP13.82□□□□□ -0.2
SPG7-209ENST00000564047 HTRA4P83105 476 aaPredicted RBP13.82□□□□□ -0.2
SPG7-209ENST00000564047 ARHGAP44Q17R89 818 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 PAN2Q504Q3 1202 aaKnown RBP13.82□□□□□ -0.2
SPG7-209ENST00000564047 FAM117BQ6P1L5 589 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 DPH6Q7L8W6 267 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 TMCO2Q7Z6W1 182 aaPredicted RBP13.82□□□□□ -0.2
SPG7-209ENST00000564047 HERC6Q8IVU3 1022 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 TTC39CQ8N584 583 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 SHC3Q92529 594 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 PANX2Q96RD6 677 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 YME1L1Q96TA2 773 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 DNAJC7Q99615 494 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 GPR88Q9GZN0 384 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 ABHD10Q9NUJ1 306 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 CACNG4Q9UBN1 327 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 DNAJB4Q9UDY4 337 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 POLIQ9UNA4 740 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 HCN4Q9Y3Q4 1203 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 ARIH1Q9Y4X5 557 aaPredicted RBP13.82□□□□□ -0.2
SPG7-209ENST00000564047 SNX9Q9Y5X1 595 aa13.82□□□□□ -0.2
SPG7-209ENST00000564047 CARNS1A5YM72 827 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 NRP1O14786 923 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 GALTP07902 379 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 ATP2A2P16615 1042 aaKnown RBP13.81□□□□□ -0.2
SPG7-209ENST00000564047 ACO1P21399 889 aaKnown RBP13.81□□□□□ -0.2
SPG7-209ENST00000564047 HNRNPH3P31942 346 aaKnown RBP13.81□□□□□ -0.2
SPG7-209ENST00000564047 SOX5P35711 763 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 GOLGA8FQ08AF8 430 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 GOLGA8DPQ0D2H9 430 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 BTG3Q14201 252 aaPredicted RBP13.81□□□□□ -0.2
SPG7-209ENST00000564047 TSR1Q2NL82 804 aaKnown RBP13.81□□□□□ -0.2
SPG7-209ENST00000564047 SFMBT2Q5VUG0 894 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 CD300LGQ6UXG3 332 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 LIMS2Q7Z4I7 341 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 TOP6BLQ8N6T0 577 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 UBR7Q8N806 425 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 C3orf58Q8NDZ4 430 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 KIAA1524Q8TCG1 905 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 MMS19Q96T76 1030 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 ARID3AQ99856 593 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 COLEC11Q9BWP8 271 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 KCNF1Q9H3M0 494 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 CWH43Q9H720 699 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 AIPL1Q9NZN9 384 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 CNTN6Q9UQ52 1028 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 FAN1Q9Y2M0 1017 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 INSL6Q9Y581 213 aa13.81□□□□□ -0.2
SPG7-209ENST00000564047 TRANK1O15050 2925 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms