RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 ATP1A2P50993 1020 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 ACLYP53396 1101 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 OSTNP61366 133 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 TMEM62Q0P6H9 643 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 PTK7Q13308 1070 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 ELOAQ14241 798 aaKnown RBP10.39□□□□□ -0.75
UBFD1-202ENST00000563366 ZNF699Q32M78 642 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 SEZ6Q53EL9 994 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 ZNF569Q5MCW4 686 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 ZNF697Q5TEC3 545 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 LMBRD2Q68DH5 695 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-202ENST00000563366 CEP120Q8N960 986 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 USP38Q8NB14 1042 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 OR5B17Q8NGF7 314 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 UBE2Q2Q8WVN8 375 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 CTNNBL1Q8WYA6 563 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-202ENST00000563366 MRGPRX2Q96LB1 330 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 KREMEN1Q96MU8 473 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 NAPGQ99747 312 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-202ENST00000563366 AGPAT1Q99943 283 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 CHST12Q9NRB3 414 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 PCDHB2Q9Y5E7 798 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 SQORQ9Y6N5 450 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 TRIP11Q15643 1979 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 LACTBL1A8MY62 500 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 GPR182O15218 404 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 SIAH2O43255 324 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 CSDE1O75534 798 aaKnown RBP10.38□□□□□ -0.75
UBFD1-202ENST00000563366 RPS6KA5O75582 802 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 NPTXRO95502 500 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 H2AFZP0C0S5 128 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 GZMAP12544 262 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 KRT5P13647 590 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 CYP11B1P15538 503 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 HOXA11P31270 313 aaPredicted RBP10.38□□□□□ -0.75
UBFD1-202ENST00000563366 USP4Q13107 963 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 ITGA7Q13683 1181 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 PTGISQ16647 500 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 CRTC2Q53ET0 693 aaPredicted RBP10.38□□□□□ -0.75
UBFD1-202ENST00000563366 ZNF667Q5HYK9 610 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 GDF6Q6KF10 455 aaPredicted RBP10.38□□□□□ -0.75
UBFD1-202ENST00000563366 TRIM72Q6ZMU5 477 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 H2AFVQ71UI9 128 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 CDR2LQ86X02 465 aaPredicted RBP10.38□□□□□ -0.75
UBFD1-202ENST00000563366 EFCAB13Q8IY85 973 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 MYRIPQ8NFW9 859 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 SLC30A5Q8TAD4 765 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 SYT11Q9BT88 431 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 DNAI2Q9GZS0 605 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 L2HGDHQ9H9P8 463 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 NOVA2Q9UNW9 492 aaKnown RBP10.38□□□□□ -0.75
UBFD1-202ENST00000563366 CNTN6Q9UQ52 1028 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 TRIM17Q9Y577 477 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 CDY2AQ9Y6F7 541 aa10.38□□□□□ -0.75
UBFD1-202ENST00000563366 MACROD2A1Z1Q3 448 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 ANKRD62A6NC57 917 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 RTN2O75298 545 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 URI1O94763 535 aaPredicted RBP10.37□□□□□ -0.75
UBFD1-202ENST00000563366 KRT19P08727 400 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 TMEM253P0C7T8 217 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 PNMA6AP0CW24 399 aaPredicted RBP10.37□□□□□ -0.75
UBFD1-202ENST00000563366 ATF7P17544 494 aaPredicted RBP10.37□□□□□ -0.75
UBFD1-202ENST00000563366 RAB27AP51159 221 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 TUBB4BP68371 445 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 ZNF200P98182 395 aaPredicted RBP10.37□□□□□ -0.75
UBFD1-202ENST00000563366 CAP1Q01518 475 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 CDR2Q01850 454 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 DHX9Q08211 1270 aaKnown RBP10.37□□□□□ -0.75
UBFD1-202ENST00000563366 MYO1EQ12965 1108 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 SLC10A6Q3KNW5 377 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 JADE1Q6IE81 842 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 ZNF598Q86UK7 904 aaKnown RBP10.37□□□□□ -0.75
UBFD1-202ENST00000563366 GLYCTKQ8IVS8 523 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 RHOT2Q8IXI1 618 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 SYCE1Q8N0S2 351 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 SLC35F6Q8N357 371 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 BEST2Q8NFU1 509 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 U2AF1L4Q8WU68 220 aaKnown RBP10.37□□□□□ -0.75
UBFD1-202ENST00000563366 TRIM11Q96F44 468 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 SNX27Q96L92 541 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 WDR24Q96S15 920 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 PI4K2AQ9BTU6 479 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 PRKD2Q9BZL6 878 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 SENP6Q9GZR1 1112 aaPredicted RBP10.37□□□□□ -0.75
UBFD1-202ENST00000563366 LACRTQ9GZZ8 138 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.37□□□□□ -0.75
UBFD1-202ENST00000563366 SEPT11Q9NVA2 429 aaKnown RBP10.37□□□□□ -0.75
UBFD1-202ENST00000563366 CNTN3Q9P232 1028 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 UBQLN1Q9UMX0 589 aaKnown RBP10.37□□□□□ -0.75
UBFD1-202ENST00000563366 NENFQ9UMX5 172 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 JRKLQ9Y4A0 524 aa10.37□□□□□ -0.75
UBFD1-202ENST00000563366 MYH10P35580 1976 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 A0A0U1RQG5 324 aaPredicted RBP10.36□□□□□ -0.75
UBFD1-202ENST00000563366 ERVH48-1M5A8F1 160 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 DDX3XO00571 662 aaKnown RBP eCLIP10.36□□□□□ -0.75
UBFD1-202ENST00000563366 CYP26A1O43174 497 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 ADH1CP00326 375 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 MYCP01106 439 aaPredicted RBP10.36□□□□□ -0.75
UBFD1-202ENST00000563366 CD4P01730 458 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 ITGB3P05106 788 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms