RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 NOMO3P69849 1222 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
HDDC3-206ENST00000561036 NFX1Q12986 1120 aaKnown RBP18.25■□□□□ 0.51
HDDC3-206ENST00000561036 PAK2Q13177 524 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 RPS6KA1Q15418 735 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 C9orf57Q5W0N0 161 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 FAM43BQ6ZT52 329 aaPredicted RBP18.25■□□□□ 0.51
HDDC3-206ENST00000561036 RSRC2Q7L4I2 434 aaKnown RBP18.25■□□□□ 0.51
HDDC3-206ENST00000561036 PEX26Q7Z412 305 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 MRPL10Q7Z7H8 261 aaKnown RBP18.25■□□□□ 0.51
HDDC3-206ENST00000561036 CTAGE6Q86UF2 777 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 CTAGE4Q8IX94 777 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 MCOLN2Q8IZK6 566 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 ZNF560Q96MR9 790 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 APOL6Q9BWW8 343 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 SDCBP2Q9H190 292 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 RNF39Q9H2S5 420 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 STARD7Q9NQZ5 370 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 TRMT13Q9NUP7 481 aaKnown RBP18.25■□□□□ 0.51
HDDC3-206ENST00000561036 TUBGCP4Q9UGJ1 667 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 PUF60Q9UHX1 559 aaKnown RBP18.25■□□□□ 0.51
HDDC3-206ENST00000561036 BARX2Q9UMQ3 279 aaPredicted RBP18.25■□□□□ 0.51
HDDC3-206ENST00000561036 STXBP5LQ9Y2K9 1186 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 PDCD11Q14690 1871 aaKnown RBP18.24■□□□□ 0.51
HDDC3-206ENST00000561036 FRMPD3Q5JV73 1810 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 PIRO00625 290 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 BUB1BO60566 1050 aaPredicted RBP18.24■□□□□ 0.51
HDDC3-206ENST00000561036 KIF4AO95239 1232 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 CALCAP01258 141 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 SKIP12755 728 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 ITGA4P13612 1032 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 RAD23BP54727 409 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 ITIH3Q06033 890 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 DSC3Q14574 896 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 LIN9Q5TKA1 542 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 NAA35Q5VZE5 725 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 MON1BQ7L1V2 547 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 DAAM2Q86T65 1068 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 TMEM35BQ8NCS4 154 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 C18orf25Q96B23 403 aaPredicted RBP18.24■□□□□ 0.51
HDDC3-206ENST00000561036 CYFIP2Q96F07 1278 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 PBKQ96KB5 322 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 LHX5Q9H2C1 402 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 SMYD3Q9H7B4 428 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 AGO3Q9H9G7 860 aaKnown RBP18.24■□□□□ 0.51
HDDC3-206ENST00000561036 OSGEPQ9NPF4 335 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 SLC38A7Q9NVC3 462 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 CNOT8Q9UFF9 292 aaKnown RBP18.24■□□□□ 0.51
HDDC3-206ENST00000561036 AMFRQ9UKV5 643 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 PADI3Q9ULW8 664 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 PTPN22Q9Y2R2 807 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 GIT1Q9Y2X7 761 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 CEP83Q9Y592 693 aa18.24■□□□□ 0.51
HDDC3-206ENST00000561036 ARVCFO00192 962 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 DNM1LO00429 736 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 NCK2O43639 380 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 CDH8P55286 799 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 LPIN1Q14693 890 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 NT5DC3Q86UY8 548 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 CREG2Q8IUH2 290 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 LRRN4CLQ8ND94 238 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 WHAMMQ8TF30 809 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 CPA5Q8WXQ8 436 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 RABGGTAQ92696 567 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 TMEM176AQ96HP8 235 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 RPS6KC1Q96S38 1066 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 NUP85Q9BW27 656 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 DNAI2Q9GZS0 605 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 CXCL16Q9H2A7 254 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 COG5Q9UP83 839 aa18.23■□□□□ 0.51
HDDC3-206ENST00000561036 SRGAP2O75044 1071 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 FAM163BP0C2L3 166 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 VDRP11473 427 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 BRD2P25440 801 aaKnown RBP18.22■□□□□ 0.51
HDDC3-206ENST00000561036 LRPAP1P30533 357 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 CD52P31358 61 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 PAFAH1B1P43034 410 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 RAP1GAPP47736 663 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 STILQ15468 1287 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 GLRA4Q5JXX5 417 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 SLC4A11Q8NBS3 891 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 ZNF564Q8TBZ8 553 aaPredicted RBP18.22■□□□□ 0.51
HDDC3-206ENST00000561036 CAGE1Q8TC20 777 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 HES6Q96HZ4 224 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 PPP1R10Q96QC0 940 aaKnown RBP18.22■□□□□ 0.51
HDDC3-206ENST00000561036 UBN1Q9NPG3 1134 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 PAK6Q9NQU5 681 aaPredicted RBP18.22■□□□□ 0.51
HDDC3-206ENST00000561036 GDAP2Q9NXN4 497 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 KLK14Q9P0G3 267 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 ADAM22Q9P0K1 906 aa18.22■□□□□ 0.51
HDDC3-206ENST00000561036 MIF4GDA9UHW6 222 aaKnown RBP18.21■□□□□ 0.51
HDDC3-206ENST00000561036 CALB1P05937 261 aa18.21■□□□□ 0.51
HDDC3-206ENST00000561036 GHRP10912 638 aa18.21■□□□□ 0.51
HDDC3-206ENST00000561036 CKBP12277 381 aa18.21■□□□□ 0.51
HDDC3-206ENST00000561036 MMP8P22894 467 aa18.21■□□□□ 0.51
HDDC3-206ENST00000561036 ERCC6LQ2NKX8 1250 aa18.21■□□□□ 0.51
HDDC3-206ENST00000561036 SV2CQ496J9 727 aa18.21■□□□□ 0.51
HDDC3-206ENST00000561036 CFAP221Q4G0U5 840 aa18.21■□□□□ 0.51
HDDC3-206ENST00000561036 ZNF394Q53GI3 561 aa18.21■□□□□ 0.51
HDDC3-206ENST00000561036 ZNF618Q5T7W0 954 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms