RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 ARID3AQ99856 593 aa12.53□□□□□ -0.4
KNSTRN-211ENST00000560673 P2RY13Q9BPV8 354 aa12.53□□□□□ -0.4
KNSTRN-211ENST00000560673 GKN1Q9NS71 199 aa12.53□□□□□ -0.4
KNSTRN-211ENST00000560673 MAFFQ9ULX9 164 aa12.53□□□□□ -0.4
KNSTRN-211ENST00000560673 E7EWF7 191 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 I3L4J1 428 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 ERVH48-1M5A8F1 160 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 RRP8O43159 456 aaKnown RBP12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 CIITAP33076 1130 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 RFC5P40937 340 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 P2RY2P41231 377 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 NPEPPSP55786 919 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 CAMK2BQ13554 666 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 RABEP1Q15276 862 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 NAB2Q15742 525 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 AMHR2Q16671 573 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 TTC30AQ86WT1 665 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 MARCH9Q86YJ5 346 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 MDGA1Q8NFP4 955 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 CCDC26Q8TAB7 109 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 OLIG1Q8TAK6 271 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 RLN3Q8WXF3 142 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 CEP170P1Q96L14 293 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 FAM83CQ9BQN1 747 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 EBF3Q9H4W6 596 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 DHX33Q9H6R0 707 aaKnown RBP12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 BARHL2Q9NY43 387 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 AFF4Q9UHB7 1163 aaKnown RBP12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 PPME1Q9Y570 386 aa12.52□□□□□ -0.41
KNSTRN-211ENST00000560673 DOPEY1Q5JWR5 2465 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 FLNCQ14315 2725 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 A0A1B0GUA9 196 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 OTOL1A6NHN0 477 aaPredicted RBP12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 H7C4K7 107 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 ALDH1A2O94788 518 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 PRAMEF12O95522 483 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 IGFBP6P24592 240 aaPredicted RBP12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 U2AF2P26368 475 aaKnown RBP eCLIP12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 EIF2S3P41091 472 aaKnown RBP12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 CSRP3P50461 194 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 CLCNKBP51801 687 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 PSMC5P62195 406 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 MBTD1Q05BQ5 628 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 ARHGAP15Q53QZ3 475 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 GPR158Q5T848 1215 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 RAB11FIP4Q86YS3 637 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 TMC8Q8IU68 726 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 FANCBQ8NB91 859 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 SPRYD3Q8NCJ5 442 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 SLC5A5Q92911 643 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 LRRC3Q9BY71 257 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 ATXN3LQ9H3M9 355 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 HPS4Q9NQG7 708 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 CHMP5Q9NZZ3 219 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 DNMT3LQ9UJW3 386 aa12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 TNRC6BQ9UPQ9 1833 aaKnown RBP12.51□□□□□ -0.41
KNSTRN-211ENST00000560673 DOPEY2Q9Y3R5 2298 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 E9PAM4 449 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 B4GALT5O43286 388 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 SLC28A2O43868 658 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 GJB3O75712 270 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 WEE1P30291 646 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 BRCC3P46736 316 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 EPHB3P54753 998 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 PLD1Q13393 1074 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 TFDP1Q14186 410 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 MXD4Q14582 209 aaPredicted RBP12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 COLEC12Q5KU26 742 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 TRIM68Q6AZZ1 485 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 MB21D2Q8IYB1 491 aaPredicted RBP12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 GJA10Q969M2 543 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 PI4K2AQ9BTU6 479 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 POLR3CQ9BUI4 534 aaPredicted RBP12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 SLKQ9H2G2 1235 aaPredicted RBP12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 FBXL5Q9UKA1 691 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 YIPF1Q9Y548 306 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
KNSTRN-211ENST00000560673 RELNP78509 3460 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 CREBBPQ92793 2442 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 NUP210Q8TEM1 1887 aaPredicted RBP12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 CNTNAP5Q8WYK1 1306 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 FAM205CA6NFA0 338 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 TBX3O15119 743 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 AP5Z1O43299 807 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 CBFA2T3O75081 653 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 PSMD10O75832 226 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 RECQL4O94761 1208 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 FGF19O95750 216 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 HLA-EP13747 358 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 CYP4A11Q02928 519 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 POU5F1BQ06416 359 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 BYSLQ13895 437 aaKnown RBP12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 EMC2Q15006 297 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 UPP1Q16831 310 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 CTXN3Q4LDR2 81 aa12.49□□□□□ -0.41
KNSTRN-211ENST00000560673 NAIF1Q69YI7 327 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms