RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TATDN2Q93075 761 aa15.9■□□□□ 0.14
SNRPA1-207ENST00000559309 PI4K2AQ9BTU6 479 aa15.9■□□□□ 0.14
SNRPA1-207ENST00000559309 HERC2P3Q9BVR0 1158 aa15.9■□□□□ 0.14
SNRPA1-207ENST00000559309 TTYH3Q9C0H2 523 aa15.9■□□□□ 0.14
SNRPA1-207ENST00000559309 INTS2Q9H0H0 1204 aaKnown RBP15.9■□□□□ 0.14
SNRPA1-207ENST00000559309 ZBP1Q9H171 429 aa15.9■□□□□ 0.14
SNRPA1-207ENST00000559309 GANQ9H2C0 597 aa15.9■□□□□ 0.14
SNRPA1-207ENST00000559309 MMRN2Q9H8L6 949 aa15.9■□□□□ 0.14
SNRPA1-207ENST00000559309 GCNT4Q9P109 453 aa15.9■□□□□ 0.14
SNRPA1-207ENST00000559309 PCDHB8Q9UN66 801 aa15.9■□□□□ 0.14
SNRPA1-207ENST00000559309 L1RE1Q9UN81 338 aa15.9■□□□□ 0.14
SNRPA1-207ENST00000559309 CNTN6Q9UQ52 1028 aa15.9■□□□□ 0.14
SNRPA1-207ENST00000559309 SF3B1O75533 1304 aaKnown RBP eCLIP15.9■□□□□ 0.146e-7■■■■■ 56
SNRPA1-207ENST00000559309 EPOPA6NHQ4 379 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 FSCN2O14926 492 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 PHACTR2O75167 634 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 TADA2AO75478 443 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 OAZ2O95190 189 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 DNAJB1P25685 340 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 CTNNB1P35222 781 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 UBASH3AP57075 661 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 INCA1Q0VD86 236 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 CETN1Q12798 172 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 WDR72Q3MJ13 1102 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 PPP2R2DQ66LE6 453 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 JAKMIP2Q96AA8 810 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 ELMO3Q96BJ8 720 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 TMEM169Q96HH4 297 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 RTP3Q9BQQ7 232 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 C11orf84Q9BUA3 381 aaPredicted RBP15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 XPO4Q9C0E2 1151 aaKnown RBP15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 NIF3L1Q9GZT8 377 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 SDCBP2Q9H190 292 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 TTYH1Q9H313 450 aaPredicted RBP15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 SLC28A3Q9HAS3 691 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 IFNKQ9P0W0 207 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 APEX2Q9UBZ4 518 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 DAAM1Q9Y4D1 1078 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 NME7Q9Y5B8 376 aa15.89■□□□□ 0.13
SNRPA1-207ENST00000559309 TRAPPC3O43617 180 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 SERPINC1P01008 464 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 ACO1P21399 889 aaKnown RBP15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 WARSP23381 471 aaKnown RBP15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 APBA1Q02410 837 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 DSG1Q02413 1049 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 UBXN1Q04323 297 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 FIGNQ5HY92 759 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 ZNF667Q5HYK9 610 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 RTP2Q5QGT7 225 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 FKBP15Q5T1M5 1219 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 KLHDC7AQ5VTJ3 777 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 CREBRFQ8IUR6 639 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 ARHGEF19Q8IW93 802 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 TMEM86AQ8N2M4 240 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 PDCL2Q8N4E4 241 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 HASPINQ8TF76 798 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 PIK3R5Q8WYR1 880 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 KREMEN1Q96MU8 473 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 FAM161BQ96MY7 647 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 CDX2Q99626 313 aaPredicted RBP15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 CRACR2AQ9BSW2 395 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 CYP3A43Q9HB55 503 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 POLIQ9UNA4 740 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 SNX9Q9Y5X1 595 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 ITIH6Q6UXX5 1313 aa15.88■□□□□ 0.13
SNRPA1-207ENST00000559309 I3L4J1 428 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 CYB561D2O14569 222 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 EPHB6O15197 1021 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 GRM6O15303 877 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 TPM2P07951 284 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 CTSAP10619 480 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 POU3F3P20264 500 aaPredicted RBP15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 RFX1P22670 979 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 TKTP29401 623 aaKnown RBP15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 KLK7P49862 253 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 CUL2Q13617 745 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 SYCP1Q15431 976 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 USP41Q3LFD5 358 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 FILIP1LQ4L180 1135 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 SPOUT1Q5T280 376 aaKnown RBP15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 OSTM1Q86WC4 334 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 LNX1Q8TBB1 728 aaPredicted RBP15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 WHAMMQ8TF30 809 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 MRFAP1L1Q96HT8 127 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 NT5C1BQ96P26 610 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 PKMYT1Q99640 499 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 IMPG2Q9BZV3 1241 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 GPR88Q9GZN0 384 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 LMAN2LQ9H0V9 348 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 RXFP1Q9HBX9 757 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 AJAP1Q9UKB5 411 aaPredicted RBP15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 DSEQ9UL01 958 aa15.87■□□□□ 0.13
SNRPA1-207ENST00000559309 ARHGEF37A1IGU5 675 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 ODC1P11926 461 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 UCHL3P15374 230 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 TBXAS1P24557 533 aaPredicted RBP15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 ZNF132P52740 706 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 JAM2P57087 298 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 ERVFC1P60507 584 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms