RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 BEST2Q8NFU1 509 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 FBXO18Q8NFZ0 1043 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 TTC8Q8TAM2 541 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 DEPDC1BQ8WUY9 529 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 DRC1Q96MC2 740 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 PGLYRP2Q96PD5 576 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 RTKNQ9BST9 563 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 MMTAG2Q9BU76 263 aaKnown RBP9.43□□□□□ -0.9
CLPX-205ENST00000559218 LRRC3Q9BY71 257 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 HAPLN2Q9GZV7 340 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 DNAJC25Q9H1X3 360 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 SLITRK6Q9H5Y7 841 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 DAXXQ9UER7 740 aaPredicted RBP9.43□□□□□ -0.9
CLPX-205ENST00000559218 RAB23Q9ULC3 237 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 DNM3Q9UQ16 869 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 RBM19Q9Y4C8 960 aaKnown RBP9.43□□□□□ -0.9
CLPX-205ENST00000559218 YIPF1Q9Y548 306 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 PCDHB6Q9Y5E3 794 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 ZFYVE26Q68DK2 2539 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 SDK1Q7Z5N4 2213 aa9.43□□□□□ -0.9
CLPX-205ENST00000559218 COL4A2P08572 1712 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 K7ESF4 209 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 M0QZQ0 153 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 TOM1L1O75674 476 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 SOAT2O75908 522 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 OAZ2O95190 189 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 MARCKSP29966 332 aaPredicted RBP9.42□□□□□ -0.9
CLPX-205ENST00000559218 TRAPPC10P48553 1259 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 CCR3P51677 355 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 GUCY2FP51841 1108 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 CDR1P51861 262 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 DUSP4Q13115 394 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 GNL2Q13823 731 aaKnown RBP9.42□□□□□ -0.9
CLPX-205ENST00000559218 SIM2Q14190 667 aaPredicted RBP9.42□□□□□ -0.9
CLPX-205ENST00000559218 PPP2R5DQ14738 602 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 NOLC1Q14978 699 aaKnown RBP eCLIP9.42□□□□□ -0.9
CLPX-205ENST00000559218 ARSIQ5FYB1 569 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 HEATR6Q6AI08 1181 aaKnown RBP9.42□□□□□ -0.9
CLPX-205ENST00000559218 TMC8Q8IU68 726 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 TTC9BQ8N6N2 239 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 CELF5Q8N6W0 485 aaKnown RBP9.42□□□□□ -0.9
CLPX-205ENST00000559218 LEMD2Q8NC56 503 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 TMEM161BQ8NDZ6 487 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 ZFYVE19Q96K21 471 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 IER2Q9BTL4 223 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 MAFFQ9ULX9 164 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 LIMCH1Q9UPQ0 1083 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 SLC27A5Q9Y2P5 690 aa9.42□□□□□ -0.9
CLPX-205ENST00000559218 IGF2RP11717 2491 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 NPHP3-ACAD11A0A0J9YXS1 232 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.41□□□□□ -0.9
CLPX-205ENST00000559218 TTC26A0AVF1 554 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 SPECC1L-ADORA2AF8WAN1 911 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 PPEF2O14830 753 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 SLC30A4O14863 429 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 GDF9O60383 454 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 RETP07949 1114 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 MAPTP10636 758 aaKnown RBP9.41□□□□□ -0.9
CLPX-205ENST00000559218 PLS3P13797 630 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 TNFSF9P41273 254 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 KPNA1P52294 538 aaPredicted RBP9.41□□□□□ -0.9
CLPX-205ENST00000559218 YWHAHQ04917 246 aaPredicted RBP9.41□□□□□ -0.9
CLPX-205ENST00000559218 MCL1Q07820 350 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 FCHO2Q0JRZ9 810 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 STRN3Q13033 797 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 ZRSR1Q15695 479 aaKnown RBP9.41□□□□□ -0.9
CLPX-205ENST00000559218 PPM1JQ5JR12 505 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 KRT79Q5XKE5 535 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 GAREM2Q75VX8 874 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 ARID3BQ8IVW6 561 aaPredicted RBP9.41□□□□□ -0.9
CLPX-205ENST00000559218 YAF2Q8IY57 180 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 SPEM1Q8N4L4 309 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 ATAD1Q8NBU5 361 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 CSGALNACT1Q8TDX6 532 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 SPIRE2Q8WWL2 714 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 TMEM209Q96SK2 561 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 PLIN2Q99541 437 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 LLPHQ9BRT6 129 aaKnown RBP9.41□□□□□ -0.9
CLPX-205ENST00000559218 NTPCRQ9BSD7 190 aaKnown RBP9.41□□□□□ -0.9
CLPX-205ENST00000559218 MKNK1Q9BUB5 465 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 SEMA4GQ9NTN9 838 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 NOL7Q9UMY1 257 aaKnown RBP9.41□□□□□ -0.9
CLPX-205ENST00000559218 TICRRQ7Z2Z1 1910 aa9.41□□□□□ -0.9
CLPX-205ENST00000559218 LACTBL1A8MY62 500 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 CHADO15335 359 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 CLDN3O15551 220 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 PRAMEF12O95522 483 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 ADRB1P08588 477 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 CLTAP09496 248 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 GUCY2CP25092 1073 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 U2AF2P26368 475 aaKnown RBP eCLIP9.4□□□□□ -0.97e-7■■■■■ 28.9
CLPX-205ENST00000559218 LRPAP1P30533 357 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 CTHP32929 405 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 AARSP49588 968 aaKnown RBP eCLIP9.4□□□□□ -0.9
CLPX-205ENST00000559218 EPHB3P54753 998 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 MLLT6P55198 1093 aaPredicted RBP9.4□□□□□ -0.9
CLPX-205ENST00000559218 TNK2Q07912 1038 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 GPR17Q13304 367 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 LRRC32Q14392 662 aa9.4□□□□□ -0.9
CLPX-205ENST00000559218 PON2Q15165 354 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms