RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 NPY5RQ15761 445 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 ITPRIPL2Q3MIP1 535 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 CTXN3Q4LDR2 81 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 TMEM196Q5HYL7 178 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 STXBP5Q5T5C0 1151 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 EEF1DP3Q658K8 133 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 FSTL4Q6MZW2 842 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 ADGRD1Q6QNK2 874 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 C19orf48Q6RUI8 117 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 KRT25Q7Z3Z0 450 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 PDZD3Q86UT5 571 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 PROSER1Q86XN7 944 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 TMC8Q8IU68 726 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 ZBTB8OSQ8IWT0 167 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 DAGLBQ8NCG7 672 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 HHIPQ96QV1 700 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 HSD17B14Q9BPX1 270 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 ADPGKQ9BRR6 497 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 MKNK1Q9BUB5 465 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 GPRC5CQ9NQ84 441 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 ANKEF1Q9NU02 776 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 OBP2AQ9NY56 170 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 GPSM3Q9Y4H4 160 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 YIPF1Q9Y548 306 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 SMIM28A0A1B0GU29 152 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 FAM221BA6H8Z2 402 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 PATE3B3GLJ2 98 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 ACKR2O00590 384 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 PODXLO00592 558 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 TRDMT1O14717 391 aaKnown RBP7.41□□□□□ -1.22
LRRC28-207ENST00000558500 MAP3K7O43318 606 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 TRAK2O60296 914 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 MARCH6O60337 910 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 USO1O60763 962 aaKnown RBP7.41□□□□□ -1.22
LRRC28-207ENST00000558500 RNF40O75150 1001 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 EDN1P05305 212 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 CPA1P15085 419 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 GCFC2P16383 781 aaKnown RBP7.41□□□□□ -1.22
LRRC28-207ENST00000558500 RARRES1P49788 294 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 GRSF1Q12849 480 aaKnown RBP eCLIP7.41□□□□□ -1.22
LRRC28-207ENST00000558500 PTPAQ15257 358 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 UAP1L1Q3KQV9 507 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 DCAF4L1Q3SXM0 396 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 C6orf132Q5T0Z8 1188 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 GALNT17Q6IS24 598 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 ZNF280DQ6N043 979 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 RNF19BQ6ZMZ0 732 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 Q6ZUG5 572 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 BEST2Q8NFU1 509 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 BPIFB1Q8TDL5 484 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 CHFRQ96EP1 664 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 CCDC43Q96MW1 224 aaKnown RBP7.41□□□□□ -1.22
LRRC28-207ENST00000558500 EIF2AK1Q9BQI3 630 aaKnown RBP7.41□□□□□ -1.22
LRRC28-207ENST00000558500 SLC4A5Q9BY07 1137 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 CCDC113Q9H0I3 377 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 DNAJC25Q9H1X3 360 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 C2orf40Q9H1Z8 148 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 SLC32A1Q9H598 525 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 EBF1Q9UH73 591 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 TPCN1Q9ULQ1 816 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 USP20Q9Y2K6 914 aa7.41□□□□□ -1.22
LRRC28-207ENST00000558500 GREB1Q4ZG55 1949 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 SPAARA0A1B0GVQ0 90 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 H0Y626 953 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 MEFVO15553 781 aaPredicted RBP7.4□□□□□ -1.22
LRRC28-207ENST00000558500 CCNT1O60563 726 aaKnown RBP7.4□□□□□ -1.22
LRRC28-207ENST00000558500 TRIM16O95361 564 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 VNN2O95498 520 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 PRAMEF12O95522 483 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 APBB3O95704 486 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 EGFP01133 1207 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 CPB1P15086 417 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 WEE1P30291 646 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 GBP1P32455 592 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 MCM2P49736 904 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 EPHB3P54753 998 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 CCT2P78371 535 aaKnown RBP7.4□□□□□ -1.22
LRRC28-207ENST00000558500 IRX4P78413 519 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 SIM1P81133 766 aaPredicted RBP7.4□□□□□ -1.22
LRRC28-207ENST00000558500 PLD1Q13393 1074 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 MCM6Q14566 821 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 MAPK6Q16659 721 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 COL28A1Q2UY09 1125 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 XKR4Q5GH76 650 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 PMS2CLQ68D20 193 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 GAREM2Q75VX8 874 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 MAEAQ7L5Y9 396 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 SYT13Q7L8C5 426 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 CYP2U1Q7Z449 544 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 NEK8Q86SG6 692 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 PIP4P1Q86T03 277 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 C11orf74Q86VG3 221 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 SLFN12Q8IYM2 578 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 TRIM22Q8IYM9 498 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 FAM177A1Q8N128 213 aaPredicted RBP7.4□□□□□ -1.22
LRRC28-207ENST00000558500 FBXL16Q8N461 479 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 APPL2Q8NEU8 664 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 PIGOQ8TEQ8 1089 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 SUSD3Q96L08 255 aa7.4□□□□□ -1.22
LRRC28-207ENST00000558500 NCOA5Q9HCD5 579 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms