RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 KLHL10Q6JEL2 608 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 TMCO3Q6UWJ1 677 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 SPATA31D4Q6ZUB0 917 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 EPM2AIP1Q7L775 607 aaPredicted RBP11.12□□□□□ -0.63
TPM1-212ENST00000558347 HAUS6Q7Z4H7 955 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 GPR149Q86SP6 731 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 SFR1Q86XK3 245 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 PALB2Q86YC2 1186 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 HPS3Q969F9 1004 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 SNX27Q96L92 541 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 TCHPQ9BT92 498 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 CARD6Q9BX69 1037 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 HAPLN2Q9GZV7 340 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 SLC39A2Q9NP94 309 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.12□□□□□ -0.63
TPM1-212ENST00000558347 TOPORSQ9NS56 1045 aaPredicted RBP11.12□□□□□ -0.63
TPM1-212ENST00000558347 ZNF446Q9NWS9 450 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 FNIP2Q9P278 1114 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 LARSQ9P2J5 1176 aaKnown RBP11.12□□□□□ -0.63
TPM1-212ENST00000558347 MYO1AQ9UBC5 1043 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 KCNG1Q9UIX4 513 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 CITO14578 2027 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 PDCD11Q14690 1871 aaKnown RBP11.11□□□□□ -0.63
TPM1-212ENST00000558347 MTCL1Q9Y4B5 1905 aaKnown RBP11.11□□□□□ -0.63
TPM1-212ENST00000558347 FANCGO15287 622 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 TGM5O43548 720 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 KIF5CO60282 957 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 CCNE1P24864 410 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 COPB1P53618 953 aaKnown RBP11.11□□□□□ -0.63
TPM1-212ENST00000558347 ZXDAP98168 799 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 KRT31Q15323 416 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 UPP1Q16831 310 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 BMT2Q1RMZ1 405 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 HSP90AA4PQ58FG1 418 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 ATAT1Q5SQI0 421 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 CENPPQ6IPU0 288 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 RSRC2Q7L4I2 434 aaKnown RBP11.11□□□□□ -0.63
TPM1-212ENST00000558347 CEP57Q86XR8 500 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 GPR65Q8IYL9 337 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 MYCT1Q8N699 235 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 C3orf58Q8NDZ4 430 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 LNX1Q8TBB1 728 aaPredicted RBP11.11□□□□□ -0.63
TPM1-212ENST00000558347 NELFBQ8WX92 580 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 GOLGA1Q92805 767 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 EDAQ92838 391 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 FIZ1Q96SL8 496 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 CLSTN3Q9BQT9 956 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 TTPALQ9BTX7 342 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 ST6GALNAC4Q9H4F1 302 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 ZHX3Q9H4I2 956 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 NR2E1Q9Y466 385 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 TECTAO75443 2155 aa11.11□□□□□ -0.63
TPM1-212ENST00000558347 CCDC195A0A1B0GUA6 201 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 A0A1W2PQC6 194 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 BICDL2A1A5D9 508 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 TMEM189-UBE2V1I3L0A0 370 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 K7ENM7 598 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 EIF3DO15371 548 aaKnown RBP eCLIP11.1□□□□□ -0.63
TPM1-212ENST00000558347 RFPL2O75678 378 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 B3GAT3O94766 335 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 GYPCP04921 128 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 EEF1GP26641 437 aaKnown RBP11.1□□□□□ -0.63
TPM1-212ENST00000558347 STX17P56962 302 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 MCL1Q07820 350 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 ALCAMQ13740 583 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 PSMD5Q16401 504 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 TCP11X2Q5H9J9 407 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 LILRA6Q6PI73 481 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 CYP26C1Q6V0L0 522 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 ZPBP2Q6X784 338 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 C15orf39Q6ZRI6 1047 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 HFE2Q6ZVN8 426 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 TMEM130Q8N3G9 435 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 CEP112Q8N8E3 955 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 LRRN4CLQ8ND94 238 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 CMASQ8NFW8 434 aaPredicted RBP11.1□□□□□ -0.63
TPM1-212ENST00000558347 ZNF507Q8TCN5 953 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 PIK3R5Q8WYR1 880 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 KCNN1Q92952 543 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 C18orf25Q96B23 403 aaPredicted RBP11.1□□□□□ -0.63
TPM1-212ENST00000558347 PKNOX2Q96KN3 472 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 UROC1Q96N76 676 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 ACAP3Q96P50 834 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 WDR24Q96S15 920 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 STRA6Q9BX79 667 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 THAP9Q9H5L6 903 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 CNTN3Q9P232 1028 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 MAPK8IP1Q9UQF2 711 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 UBE4BO95155 1302 aa11.1□□□□□ -0.63
TPM1-212ENST00000558347 KCNJ18B7U540 433 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 H0YCG3 227 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 I3L4J1 428 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 CLDN3O15551 220 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 ADAM12O43184 909 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 PPP1R37O75864 691 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
TPM1-212ENST00000558347 CXCL8P10145 99 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 KCNE1P15382 129 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 SCP2P22307 547 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 NMT1P30419 496 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms