RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 RPF1Q9H9Y2 349 aaKnown RBP11.22□□□□□ -0.61
TPM1-210ENST00000558264 PNMA3Q9UL41 463 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 IVNS1ABPQ9Y6Y0 642 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 FAM187AA6NFU0 413 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 GOLGA6L10A6NI86 522 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 LACTBL1A8MY62 500 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 MYZAPP0CAP1 466 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 STAG3L1P0CL83 205 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 KRT10P13645 584 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 PSMC4P43686 418 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 ZNF132P52740 706 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 SGSM1Q2NKQ1 1148 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 PRAMEF19Q5SWL8 479 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 TXNRD3NBQ6F5E7 133 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 DENND1BQ6P3S1 775 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 UBR7Q8N806 425 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 C1orf127Q8N9H9 656 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 KCNN1Q92952 543 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 ANKRD36BP1Q96IX9 119 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 ATP6V1G3Q96LB4 118 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 SDCBP2Q9H190 292 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 CXCL16Q9H2A7 254 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 SMYD3Q9H7B4 428 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 RSPH14Q9UHP6 348 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 SIX4Q9UIU6 781 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 F8VP50 259 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 PIK3R2O00459 728 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 ADCY6O43306 1168 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 GAS2O43903 313 aaKnown RBP11.22□□□□□ -0.61
TPM1-210ENST00000558264 SNAI1O95863 264 aaPredicted RBP11.22□□□□□ -0.61
TPM1-210ENST00000558264 ITGBL1O95965 494 aaPredicted RBP11.22□□□□□ -0.61
TPM1-210ENST00000558264 GH1P01241 217 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 MYBL1P10243 752 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 NR1D1P20393 614 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 OGDHQ02218 1023 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 KRT17Q04695 432 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 ADCY2Q08462 1091 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 IFFO1Q0D2I5 559 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 KRT71Q3SY84 523 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 WDTC1Q8N5D0 677 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 TRIM11Q96F44 468 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 PWWP2AQ96N64 755 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 TWNKQ96RR1 684 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 FAM49AQ9H0Q0 323 aaPredicted RBP11.22□□□□□ -0.61
TPM1-210ENST00000558264 TMBIM4Q9HC24 238 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 ASIC3Q9UHC3 531 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 PCYOX1Q9UHG3 505 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 CNTN6Q9UQ52 1028 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 MGAMO43451 1857 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 GRIN2DO15399 1336 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 TLDC2A0PJX2 215 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 ECEL1O95672 775 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 HSPA6P17066 643 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 ARF4P18085 180 aaPredicted RBP11.21□□□□□ -0.61
TPM1-210ENST00000558264 MMP8P22894 467 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 PHKA2P46019 1235 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 SLC26A2P50443 739 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 LACTBP83111 547 aaPredicted RBP11.21□□□□□ -0.61
TPM1-210ENST00000558264 ZNF252P-AS1Q0IIN9 211 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 LAMC2Q13753 1193 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 PLEKHA7Q6IQ23 1121 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 PHF13Q86YI8 300 aaPredicted RBP11.21□□□□□ -0.61
TPM1-210ENST00000558264 FEZF2Q8TBJ5 459 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 HAUS1Q96CS2 278 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 C16orf70Q9BSU1 422 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 SEMA4AQ9H3S1 761 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 PDZD7Q9H5P4 517 aa11.21□□□□□ -0.61
TPM1-210ENST00000558264 H3BRB1 525 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 FSCN2O14926 492 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 SMPD1P17405 629 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 ATF7P17544 494 aaPredicted RBP11.21□□□□□ -0.62
TPM1-210ENST00000558264 PMS2P54278 862 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 CCNA1P78396 465 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 AMHR2Q16671 573 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 KIZQ2M2Z5 673 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 DNAJC24Q6P3W2 148 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 DCUN1D2Q6PH85 259 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 TRIM72Q6ZMU5 477 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 GPR142Q7Z601 462 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 CD302Q8IX05 232 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 KIAA0319LQ8IZA0 1049 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 EIF1ADQ8N9N8 165 aaKnown RBP11.21□□□□□ -0.62
TPM1-210ENST00000558264 JPH2Q9BR39 696 aaPredicted RBP11.21□□□□□ -0.62
TPM1-210ENST00000558264 EPB41L4BQ9H329 900 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 TUT1Q9H6E5 874 aaKnown RBP11.21□□□□□ -0.62
TPM1-210ENST00000558264 MRPL47Q9HD33 250 aaKnown RBP11.21□□□□□ -0.62
TPM1-210ENST00000558264 CYTH4Q9UIA0 394 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 NOVA2Q9UNW9 492 aaKnown RBP11.21□□□□□ -0.62
TPM1-210ENST00000558264 TNFSF13BQ9Y275 285 aa11.21□□□□□ -0.62
TPM1-210ENST00000558264 SLCO1A2P46721 670 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 CDR1P51861 262 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 PPP2R5EQ16537 467 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 CYP1B1Q16678 543 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 ODF2Q5BJF6 829 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 SHCBP1Q8NEM2 672 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.2□□□□□ -0.62
TPM1-210ENST00000558264 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.2□□□□□ -0.62
TPM1-210ENST00000558264 SETD4Q9NVD3 440 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 PARVAQ9NVD7 372 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms