RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 INTS13Q9NVM9 706 aa13.49□□□□□ -0.25
SLIRP-211ENST00000557623 ZDHHC7Q9NXF8 308 aa13.49□□□□□ -0.25
SLIRP-211ENST00000557623 FBXW11Q9UKB1 542 aa13.49□□□□□ -0.25
SLIRP-211ENST00000557623 DSEQ9UL01 958 aa13.49□□□□□ -0.25
SLIRP-211ENST00000557623 TRAF3IP3Q9Y228 551 aa13.49□□□□□ -0.25
SLIRP-211ENST00000557623 CDY1Q9Y6F8 540 aa13.49□□□□□ -0.25
SLIRP-211ENST00000557623 PPEF2O14830 753 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 OAZ2O95190 189 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 ITGB3P05106 788 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 WNT7BP56706 349 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 RBP5P82980 135 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 CYP24A1Q07973 514 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 NFIL3Q16649 462 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 DUOXA2Q1HG44 320 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 LIN9Q5TKA1 542 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 ZNF658Q5TYW1 1059 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-211ENST00000557623 RTL10Q7L3V2 364 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 GPR149Q86SP6 731 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 TMEM130Q8N3G9 435 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 CSGALNACT2Q8N6G5 542 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 LRRC52Q8N7C0 313 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 C12orf76Q8N812 135 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-211ENST00000557623 C1orf127Q8N9H9 656 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 SPATA20Q8TB22 786 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 SENP8Q96LD8 212 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 MFSD14AQ96MC6 490 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 NECAB3Q96P71 396 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-211ENST00000557623 PHF7Q9BWX1 381 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-211ENST00000557623 RHOBTB2Q9BYZ6 727 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 MTMR12Q9C0I1 747 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 DMAC2Q9NW81 257 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 FRMD4BQ9Y2L6 1034 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 PCDHA5Q9Y5H7 936 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 XIRP2A4UGR9 3374 aa13.48□□□□□ -0.25
SLIRP-211ENST00000557623 SPTBN5Q9NRC6 3674 aaKnown RBP13.47□□□□□ -0.25
SLIRP-211ENST00000557623 CCDC195A0A1B0GUA6 201 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 KPNA7A9QM74 516 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 TNFRSF10AO00220 468 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 ADAM12O43184 909 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 TBC1D4O60343 1298 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 NR3C1P04150 777 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 KRT19P08727 400 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 SPATA31D3P0C874 917 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 DLATP10515 647 aaKnown RBP13.47□□□□□ -0.25
SLIRP-211ENST00000557623 TNNI1P19237 187 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 RPL13P26373 211 aaKnown RBP13.47□□□□□ -0.25
SLIRP-211ENST00000557623 POLR2BP30876 1174 aaKnown RBP13.47□□□□□ -0.25
SLIRP-211ENST00000557623 ZP2Q05996 745 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 UVSSAQ2YD98 709 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 COBLL1Q53SF7 1204 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 OVOS1Q6IE37 1185 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 TMC5Q6UXY8 1006 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 SPATA31D4Q6ZUB0 917 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 CCDC149Q6ZUS6 474 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 METTL23Q86XA0 190 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 ZNF461Q8TAF7 563 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 CGRRF1Q99675 332 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 FBXL5Q9UKA1 691 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 MAFFQ9ULX9 164 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 AGAP1Q9UPQ3 857 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 MAPK8IP1Q9UQF2 711 aa13.47□□□□□ -0.25
SLIRP-211ENST00000557623 OR6C75A6NL08 312 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 CYB561D2O14569 222 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 MAPK13O15264 365 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 SPTLC1O15269 473 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 ZMYND10O75800 440 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 PAPLNO95428 1278 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 CYP11A1P05108 521 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 HNRNPA1P09651 372 aaKnown RBP eCLIP13.46□□□□□ -0.25
SLIRP-211ENST00000557623 HOXA9P31269 272 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 ELF1P32519 619 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 SSTR3P32745 418 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-211ENST00000557623 PPP1R2P41236 205 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 AP3M2P53677 418 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 ROR1Q01973 937 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 MYO1EQ12965 1108 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 PPM1LQ5SGD2 360 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 TPGS2Q68CL5 300 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 RSPO2Q6UXX9 243 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-211ENST00000557623 CLEC17AQ6ZS10 378 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 GJD3Q8N144 294 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 CCDC127Q96BQ5 260 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 NR2E1Q9Y466 385 aa13.46□□□□□ -0.25
SLIRP-211ENST00000557623 TIMM13Q9Y5L4 95 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-211ENST00000557623 WDR27A2RRH5 827 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 RFPL2O75678 378 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 ABLIM3O94929 683 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 C8AP07357 584 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 CPB1P15086 417 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 ATF2P15336 505 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 NR2F2P24468 414 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 PRCPP42785 496 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 ARPP19P56211 112 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 BFSP1Q12934 665 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 STIM1Q13586 685 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 EDRF1Q3B7T1 1238 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 CEP135Q66GS9 1140 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 LMBRD2Q68DH5 695 aaPredicted RBP13.45□□□□□ -0.26
SLIRP-211ENST00000557623 TRAPPC11Q7Z392 1133 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 THEM5Q8N1Q8 247 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms