RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 SERTM1A2A2V5 107 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 F8W810 466 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 H0Y626 953 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 MEIS1O00470 390 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 TRIM16O95361 564 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 CAVIN2O95810 425 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 CAPNS1P04632 268 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 PTMAP06454 111 aaKnown RBP7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 PSMC3P17980 439 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 SDSP20132 328 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 FCARP24071 287 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 SMARCA1P28370 1054 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 NOS2P35228 1153 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 ZNF76P36508 570 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 DNM2P50570 870 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 FAM193AP78312 1265 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 CREB5Q02930 508 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 DSC1Q08554 894 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 ELF2Q15723 593 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 TBCELQ5QJ74 424 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 ZNF746Q6NUN9 644 aaPredicted RBP7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 PRSS55Q6UWB4 352 aaPredicted RBP7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 Q6ZS52 159 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 CAPN12Q6ZSI9 719 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 CYB5R4Q7L1T6 521 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 RTL10Q7L3V2 364 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 NIPA1Q7RTP0 329 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 CATIPQ7Z7H3 387 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 ZNF410Q86VK4 478 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 LURAP1LQ8IV03 231 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 CNNM3Q8NE01 707 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 CSGALNACT1Q8TDX6 532 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 ZDHHC1Q8WTX9 485 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 DEPDC1BQ8WUY9 529 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 MYO19Q96H55 970 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 LRIG1Q96JA1 1093 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 FDXACB1Q9BRP7 624 aaPredicted RBP7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 APOL6Q9BWW8 343 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 GPAMQ9HCL2 828 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 NRBP2Q9NSY0 501 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 AGPAT5Q9NUQ2 364 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 GABBR1Q9UBS5 961 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 SEPT3Q9UH03 358 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 ADAM28Q9UKQ2 775 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 PCDHA10Q9Y5I2 948 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 SPTA1P02549 2419 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 ZNF462Q96JM2 2506 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 FAM221BA6H8Z2 402 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 ARL5CA6NH57 179 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 IPO5O00410 1097 aaKnown RBP7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 IFIT3O14879 490 aaKnown RBP7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 ZNF263O14978 683 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 DHX15O43143 795 aaKnown RBP7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 ICMTO60725 284 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 RHOBTB1O94844 696 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 FOSP01100 380 aaPredicted RBP7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 RHOP08100 348 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 ITGA4P13612 1032 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 CEBPBP17676 345 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 TRDNQ13061 729 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 NOLC1Q14978 699 aaKnown RBP eCLIP7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 SART3Q15020 963 aaKnown RBP7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 PSMD5Q16401 504 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 SLC5A9Q2M3M2 681 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 PLK5Q496M5 336 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 AXDND1Q5T1B0 1012 aaPredicted RBP7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 CCDC183Q5T5S1 534 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 SYNPOQ8N3V7 929 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 PDCL2Q8N4E4 241 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 CTCFLQ8NI51 663 aaPredicted RBP7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 HNRNPLLQ8WVV9 542 aaKnown RBP7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 TMX3Q96JJ7 454 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 CLSTN3Q9BQT9 956 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 LZTS2Q9BRK4 669 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 C8orf33Q9H7E9 229 aaPredicted RBP7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 AVENQ9NQS1 362 aaPredicted RBP7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 TBC1D22BQ9NU19 505 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 C2orf42Q9NWW7 574 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 ZNF232Q9UNY5 417 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 KIF3AQ9Y496 699 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 SAMM50Q9Y512 469 aa7.53□□□□□ -1.2
SPTLC2-206ENST00000557566 SF3B1O75533 1304 aaKnown RBP eCLIP7.52□□□□□ -1.24e-6■■■■■ 145.4
SPTLC2-206ENST00000557566 SALL3Q9BXA9 1300 aa7.52□□□□□ -1.2
SPTLC2-206ENST00000557566 VWA8A3KMH1 1905 aa7.52□□□□□ -1.2
SPTLC2-206ENST00000557566 URB1O60287 2271 aaKnown RBP7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 THADAQ6YHU6 1953 aa7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 BCLAF3A2AJT9 711 aaKnown RBP7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 KHNYNO15037 678 aaKnown RBP7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 ZNF862O60290 1169 aa7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 TADA2AO75478 443 aa7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 PLA2G2AP14555 144 aa7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 MLH1P40692 756 aa7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 PXNP49023 591 aaPredicted RBP7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 SCNN1GP51170 649 aa7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 KPNA1P52294 538 aaPredicted RBP7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 SIM1P81133 766 aaPredicted RBP7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 PRKCEQ02156 737 aa7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 SCAPQ12770 1279 aa7.52□□□□□ -1.21
SPTLC2-206ENST00000557566 DRP2Q13474 957 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms