RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 DCLK1O15075 740 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 NEMFO60524 1076 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 PFKFB2O60825 505 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 CCDC192P0DO97 292 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 CPB1P15086 417 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 XBP1P17861 261 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 RPA1P27694 616 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 KRT2P35908 639 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 NOVA1P51513 510 aaKnown RBP13.72□□□□□ -0.21
PSEN1-221ENST00000557293 YARSP54577 528 aaKnown RBP13.72□□□□□ -0.21
PSEN1-221ENST00000557293 GPR17Q13304 367 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 SLC10A6Q3KNW5 377 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 CENPPQ6IPU0 288 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 LRSAM1Q6UWE0 723 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 DNAJB7Q7Z6W7 309 aaPredicted RBP13.72□□□□□ -0.21
PSEN1-221ENST00000557293 TTC9BQ8N6N2 239 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 APPL2Q8NEU8 664 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 ZBTB45Q96K62 511 aaPredicted RBP13.72□□□□□ -0.21
PSEN1-221ENST00000557293 ACAP3Q96P50 834 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 PGLYRP2Q96PD5 576 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 FAM83CQ9BQN1 747 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 TARS2Q9BW92 718 aaKnown RBP13.72□□□□□ -0.21
PSEN1-221ENST00000557293 IL21Q9HBE4 155 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 HPS4Q9NQG7 708 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 TOPORSQ9NS56 1045 aaPredicted RBP13.72□□□□□ -0.21
PSEN1-221ENST00000557293 GKN1Q9NS71 199 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 ORC3Q9UBD5 711 aaPredicted RBP13.72□□□□□ -0.21
PSEN1-221ENST00000557293 IGF2RP11717 2491 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 BCLAF3A2AJT9 711 aaKnown RBP13.71□□□□□ -0.21
PSEN1-221ENST00000557293 ARHGEF35A5YM69 484 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 CDX4O14627 284 aaPredicted RBP13.71□□□□□ -0.21
PSEN1-221ENST00000557293 SOAT2O75908 522 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 MCM4P33991 863 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 EPHB3P54753 998 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 FOXC1Q12948 553 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 ITPRIPL2Q3MIP1 535 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 GPR158Q5T848 1215 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 DAW1Q8N136 415 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 CAMKK1Q8N5S9 505 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 ATAD1Q8NBU5 361 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 FAM200AQ8TCP9 573 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 BPIFB1Q8TDL5 484 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 PSMG2Q969U7 264 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 EDEM2Q9BV94 578 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 SLC46A2Q9BY10 475 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 ATXN3LQ9H3M9 355 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 TMEM134Q9H6X4 195 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 TPCN1Q9ULQ1 816 aa13.71□□□□□ -0.21
PSEN1-221ENST00000557293 DPYSL4O14531 572 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 CDKL5O76039 1030 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 EGFP01133 1207 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 MCF2P10911 925 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 GABRR2P28476 465 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 NPTX2P47972 431 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 AARSP49588 968 aaKnown RBP eCLIP13.7□□□□□ -0.22
PSEN1-221ENST00000557293 RING1Q06587 406 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 ZNF252P-AS1Q0IIN9 211 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 ZBTB6Q15916 424 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 ZNF568Q3ZCX4 644 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 SEZ6Q53EL9 994 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 SH3PXD2AQ5TCZ1 1133 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 NAIF1Q69YI7 327 aaPredicted RBP13.7□□□□□ -0.22
PSEN1-221ENST00000557293 EZH1Q92800 747 aaPredicted RBP13.7□□□□□ -0.22
PSEN1-221ENST00000557293 KIFAP3Q92845 792 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 IFT74Q96LB3 600 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 SCNM1Q9BWG6 230 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 ADAM33Q9BZ11 813 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 SMG9Q9H0W8 520 aaKnown RBP13.7□□□□□ -0.22
PSEN1-221ENST00000557293 TASP1Q9H6P5 420 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 PDRG1Q9NUG6 133 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 TUBGCP4Q9UGJ1 667 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 SLC8A2Q9UPR5 921 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 ASB3Q9Y575 518 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 AKAP13Q12802 2813 aa13.7□□□□□ -0.22
PSEN1-221ENST00000557293 LNP1A1A4G5 178 aa13.69□□□□□ -0.22
PSEN1-221ENST00000557293 MTMR11A4FU01 709 aa13.69□□□□□ -0.22
PSEN1-221ENST00000557293 TMEM8BA6NDV4 472 aa13.69□□□□□ -0.22
PSEN1-221ENST00000557293 CAVIN2O95810 425 aa13.69□□□□□ -0.22
PSEN1-221ENST00000557293 CSRP1P21291 193 aaKnown RBP13.69□□□□□ -0.22
PSEN1-221ENST00000557293 MARCKSP29966 332 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-221ENST00000557293 GALK1P51570 392 aa13.69□□□□□ -0.22
PSEN1-221ENST00000557293 CYP4F8P98187 520 aa13.69□□□□□ -0.22
PSEN1-221ENST00000557293 PLCB2Q00722 1185 aa13.69□□□□□ -0.22
PSEN1-221ENST00000557293 HAUS6Q7Z4H7 955 aa13.69□□□□□ -0.22
PSEN1-221ENST00000557293 APBB1IPQ7Z5R6 666 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-221ENST00000557293 RIN3Q8TB24 985 aa13.69□□□□□ -0.22
PSEN1-221ENST00000557293 ARHGAP28Q9P2N2 729 aa13.69□□□□□ -0.22
PSEN1-221ENST00000557293 NUP210Q8TEM1 1887 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-221ENST00000557293 ABCA7Q8IZY2 2146 aa13.69□□□□□ -0.22
PSEN1-221ENST00000557293 LAMA1P25391 3075 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 PKD1L2Q7Z442 2459 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 ATG13O75143 517 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 RNF40O75150 1001 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 CEACAM1P13688 526 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 MUTP22033 750 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 LRPAP1P30533 357 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 MCM7P33993 719 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 ALDH1A3P47895 512 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 MCM2P49736 904 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 PEX3P56589 373 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms