RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 RSPH3Q86UC2 560 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 TMEM57Q8N5G2 664 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 MRPL43Q8N983 215 aaKnown RBP5.46□□□□□ -1.54
SCFD1-223ENST00000557076 TDRD5Q8NAT2 981 aaKnown RBP5.46□□□□□ -1.54
SCFD1-223ENST00000557076 SECISBP2LQ93073 1101 aaKnown RBP5.46□□□□□ -1.54
SCFD1-223ENST00000557076 TCTN2Q96GX1 697 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 GPR20Q99678 358 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 APOL5Q9BWW9 433 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 NACAP1Q9BZK3 213 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 FOXP3Q9BZS1 431 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 AGO3Q9H9G7 860 aaKnown RBP5.46□□□□□ -1.54
SCFD1-223ENST00000557076 MLXIPQ9HAP2 919 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 MAP3K20Q9NYL2 800 aaKnown RBP5.46□□□□□ -1.54
SCFD1-223ENST00000557076 DLGAP2Q9P1A6 1054 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 IGSF9Q9P2J2 1179 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 FBXL21Q9UKT6 434 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 DUSP12Q9UNI6 340 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 SIT1Q9Y3P8 196 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 PCDHB7Q9Y5E2 793 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 SPEGQ15772 3267 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 MBLAC1A4D2B0 266 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 TSPY2A6NKD2 308 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 HIDE1A8MVS5 230 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 GPAA1O43292 621 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 ANP32CO43423 234 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 NMT2O60551 498 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 DNAJA2O60884 412 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 RAB11FIP3O75154 756 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 GGPS1O95749 300 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 ZFYP08048 801 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 FGRP09769 529 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 TOP1P11387 765 aaKnown RBP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 SCG2P13521 617 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 AFF3P51826 1226 aaKnown RBP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 SHC2P98077 582 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 KRT17Q04695 432 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 PPARAQ07869 468 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 DMWDQ09019 674 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 PAN2Q504Q3 1202 aaKnown RBP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 SND1Q7KZF4 910 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 OTOP3Q7RTS5 596 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 THNSL1Q8IYQ7 743 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 SAMD3Q8N6K7 520 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 GOLM1Q8NBJ4 401 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 RIN2Q8WYP3 895 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 MRPS27Q92552 414 aaKnown RBP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 APPBP2Q92624 585 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 FRAT1Q92837 279 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 DACT3Q96B18 629 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 TTC14Q96N46 770 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 TMEM47Q9BQJ4 181 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 EPB41L4AQ9HCS5 686 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 PXMP2Q9NR77 195 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 TCP11L1Q9NUJ3 509 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 TYW1Q9NV66 732 aaKnown RBP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 COL20A1Q9P218 1284 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 DBR1Q9UK59 544 aaKnown RBP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 TNNQ9UQP3 1299 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCFD1-223ENST00000557076 HCFC2Q9Y5Z7 792 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 DMXL2Q8TDJ6 3036 aa5.45□□□□□ -1.54
SCFD1-223ENST00000557076 CEP295Q9C0D2 2601 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 BPTFQ12830 3046 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 C2orf71A6NGG8 1288 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 NOP56O00567 594 aaKnown RBP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 SLC30A4O14863 429 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 RNF113AO15541 343 aaKnown RBP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 ORC4O43929 436 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 SORBS3O60504 671 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 CLASP2O75122 1294 aaKnown RBP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 UBOX5O94941 541 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 EFEMP2O95967 443 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 SNHG28P0DPA3 235 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 PDHBP11177 359 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 CD52P31358 61 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 VIPR1P32241 457 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 SARSP49591 514 aaKnown RBP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 ERVFRD-1P60508 538 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 YBX1P67809 324 aaKnown RBP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 FAM189BP81408 668 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 GHRHRQ02643 423 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 FAM160A1Q05DH4 1040 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 ZNF543Q08ER8 600 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 TMEM62Q0P6H9 643 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 NEDD9Q14511 834 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 NONOQ15233 471 aaKnown RBP eCLIP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 ARSHQ5FYA8 562 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 GPATCH4Q5T3I0 446 aaKnown RBP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 TMCO4Q5TGY1 634 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 ERICH6BQ5W0A0 696 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 ZKSCAN2Q63HK3 967 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 KIAA1841Q6NSI8 718 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 XRRA1Q6P2D8 792 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 METTL7BQ6UX53 244 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 MAML2Q8IZL2 1156 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 KBTBD3Q8NAB2 608 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 COLGALT1Q8NBJ5 622 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 NAV1Q8NEY1 1877 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 CXorf38Q8TB03 319 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 LMBR1Q8WVP7 490 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms