RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PPP1R2P3Q6NXS1 205 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 TMCO3Q6UWJ1 677 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 MPZL3Q6UWV2 235 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 RASAL3Q86YV0 1011 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 RHOT2Q8IXI1 618 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 PPM1KQ8N3J5 372 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 GALNT6Q8NCL4 622 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 COG1Q8WTW3 980 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 CTNNBL1Q8WYA6 563 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-235ENST00000556082 DDX1Q92499 740 aaKnown RBP8.9□□□□□ -0.98
ATXN3-235ENST00000556082 KAT5Q92993 513 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 CCDC94Q9BW85 323 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-235ENST00000556082 TUT1Q9H6E5 874 aaKnown RBP8.9□□□□□ -0.98
ATXN3-235ENST00000556082 RUBCNLQ9H714 662 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 PDE11AQ9HCR9 933 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 TOPORSQ9NS56 1045 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-235ENST00000556082 C1orf112Q9NSG2 853 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 NDFIP2Q9NV92 336 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 PRMT7Q9NVM4 692 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-235ENST00000556082 STXBP5LQ9Y2K9 1186 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 Q9Y3F1 56 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 PCDHB2Q9Y5E7 798 aa8.9□□□□□ -0.98
ATXN3-235ENST00000556082 DOCK5Q9H7D0 1870 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 A6NJR5 290 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 CDK2AP1O14519 115 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 CYP26A1O43174 497 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 B4GALT4O60513 344 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 KIF4AO95239 1232 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 IL18RAPO95256 599 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 SGPL1O95470 568 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 VNN1O95497 513 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 FTLP02792 175 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-235ENST00000556082 ACO1P21399 889 aaKnown RBP8.89□□□□□ -0.99
ATXN3-235ENST00000556082 NOP2P46087 812 aaKnown RBP8.89□□□□□ -0.99
ATXN3-235ENST00000556082 GPC5P78333 572 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 TNFAIP2Q03169 654 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 PCBP1Q15365 356 aaKnown RBP eCLIP8.89□□□□□ -0.99
ATXN3-235ENST00000556082 DGKDQ16760 1214 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 DUOXA2Q1HG44 320 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 GLE1Q53GS7 698 aaKnown RBP8.89□□□□□ -0.99
ATXN3-235ENST00000556082 ATF7IP2Q5U623 682 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 RGMBQ6NW40 437 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 NFRKBQ6P4R8 1299 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 MTHFD1LQ6UB35 978 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 C17orf99Q6UX52 265 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 TRIM72Q6ZMU5 477 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 NOP9Q86U38 636 aaKnown RBP8.89□□□□□ -0.99
ATXN3-235ENST00000556082 ZNF410Q86VK4 478 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 RHPN2Q8IUC4 686 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 RPUSD2Q8IZ73 545 aaKnown RBP8.89□□□□□ -0.99
ATXN3-235ENST00000556082 LRRC71Q8N4P6 559 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 NOA1Q8NC60 698 aaKnown RBP8.89□□□□□ -0.99
ATXN3-235ENST00000556082 SPATA4Q8NEY3 305 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 NPLOC4Q8TAT6 608 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 SLC35G2Q8TBE7 412 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 CAGE1Q8TC20 777 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 ACTRT1Q8TDG2 376 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 SLC20A1Q8WUM9 679 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 TAF4BQ92750 862 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 PCDHB18PQ96TA0 734 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 TCHPQ9BT92 498 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 IFT122Q9HBG6 1241 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 ARFGAP3Q9NP61 516 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 ZNF446Q9NWS9 450 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 OGFRQ9NZT2 677 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 ANKFY1Q9P2R3 1169 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 MKL2Q9ULH7 1088 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 TTC7AQ9ULT0 858 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-235ENST00000556082 GNEQ9Y223 722 aaKnown RBP8.89□□□□□ -0.99
ATXN3-235ENST00000556082 PCDHGC4Q9Y5F7 938 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 SIP14410 1827 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 ZNF236Q9UL36 1845 aa8.89□□□□□ -0.99
ATXN3-235ENST00000556082 ZNFX1Q9P2E3 1918 aaKnown RBP8.88□□□□□ -0.99
ATXN3-235ENST00000556082 PTPRJQ12913 1337 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 INO80B-WBP1J3KQ70 363 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 IGF2BP3O00425 579 aaKnown RBP eCLIP8.88□□□□□ -0.99
ATXN3-235ENST00000556082 ZNF185O15231 689 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 NCK2O43639 380 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 ERLIN1O75477 346 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 ASS1P00966 412 aaKnown RBP8.88□□□□□ -0.99
ATXN3-235ENST00000556082 TFRCP02786 760 aaKnown RBP8.88□□□□□ -0.99
ATXN3-235ENST00000556082 CYP1A2P05177 515 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 MMP3P08254 477 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 CLTAP09496 248 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 MCF2P10911 925 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 BMP4P12644 408 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 USP8P40818 1118 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 PIK3CAP42336 1068 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 MATR3P43243 847 aaKnown RBP eCLIP8.88□□□□□ -0.99
ATXN3-235ENST00000556082 PDE6CP51160 858 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 ZNF157P51786 506 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-235ENST00000556082 FMO1Q01740 532 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 CUL2Q13617 745 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 NCOA4Q13772 614 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 CLUL1Q15846 466 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 SGSM1Q2NKQ1 1148 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 ZBTB41Q5SVQ8 909 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 MARCH8Q5T0T0 291 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 ACAD10Q6JQN1 1059 aa8.88□□□□□ -0.99
ATXN3-235ENST00000556082 CCDC70Q6NSX1 233 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms