RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 SERPINB8P50452 374 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 AUHQ13825 339 aaKnown RBP10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 RAPGEF1Q13905 1077 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 PSMD6Q15008 389 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 MYLK3Q32MK0 819 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 FAM83BQ5T0W9 1011 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 TPTE2Q6XPS3 522 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 FASTKD5Q7L8L6 764 aaKnown RBP10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 ZNF34Q8IZ26 560 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 LRRC15Q8TF66 581 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 GLG1Q92896 1179 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 SLC39A13Q96H72 371 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 STRBPQ96SI9 672 aaKnown RBP10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 STMN4Q9H169 189 aaPredicted RBP10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 DCLRE1BQ9H816 532 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 ZDHHC18Q9NUE0 388 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 TCP11L1Q9NUJ3 509 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 H3BUI4 141 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 SNPHO15079 494 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 GH1P01241 217 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 SLC4A1P02730 911 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 COPAP53621 1224 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 PDCD4Q53EL6 469 aaKnown RBP10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 WDR44Q5JSH3 913 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 ARMC4Q5T2S8 1044 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 CGB2Q6NT52 195 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 RTL10Q7L3V2 364 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 PEX26Q7Z412 305 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 LRRTM3Q86VH5 581 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 CAND1Q86VP6 1230 aaKnown RBP10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 RAVER1Q8IY67 606 aaKnown RBP10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 SLC7A3Q8WY07 619 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 STARD8Q92502 1023 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 TGS1Q96RS0 853 aaKnown RBP10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 SPATA16Q9BXB7 569 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 KIAA1683Q9H0B3 1180 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 PIH1D3Q9NQM4 214 aaKnown RBP10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 PCDHGA8Q9Y5G5 932 aa10.91□□□□□ -0.66
EFCAB11-208ENST00000555872 KRBA1A5PL33 1030 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 FOXO6A8MYZ6 492 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 FAM47E-STBD1D6RA91 191 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 GNRH1P01148 92 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 FGGP02679 453 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 CYP1A1P04798 512 aaPredicted RBP10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 POLR2EP19388 210 aaKnown RBP10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 KLRC3Q07444 240 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 MAPRE1Q15691 268 aaKnown RBP10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 INSCQ1MX18 579 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 KHDC1Q4VXA5 237 aaKnown RBP10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 RNF43Q68DV7 783 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 NLRP10Q86W26 655 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 GATA6Q92908 595 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 TUBGCP5Q96RT8 1024 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 CUEDC2Q9H467 287 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 IL1RAPL1Q9NZN1 696 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 PDP2Q9P2J9 529 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 GPC6Q9Y625 555 aaPredicted RBP10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 RPTORQ8N122 1335 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 TMEM238LA0A1B0GVL6 79 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 CIAO1O76071 339 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 CAMTA2O94983 1202 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 NAGAP17050 411 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 SCNN1DP51172 638 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 MARSP56192 900 aaKnown RBP10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 PKN2Q16513 984 aaKnown RBP10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 CDONQ4KMG0 1287 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 WASHC2DQ5SRD0 308 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 DTHD1Q6ZMT9 781 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 PRR23CQ6ZRP0 262 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 CEP68Q76N32 757 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 GALNT7Q86SF2 657 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 EFCAB3Q8N7B9 438 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 LINC00116Q8NCU8 138 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 SLC22A8Q8TCC7 542 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 NRG4Q8WWG1 115 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 SPON1Q9HCB6 807 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 CYLDQ9NQC7 956 aa10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 BAZ2BQ9UIF8 2168 aaKnown RBP10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 ZNF330Q9Y3S2 320 aaPredicted RBP10.9□□□□□ -0.66
EFCAB11-208ENST00000555872 UBR3Q6ZT12 1888 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 KMOO15229 486 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 PRPF3O43395 683 aaKnown RBP10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 PRMT3O60678 531 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 ATG7O95352 703 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 MAP3K6O95382 1288 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 PDE6AP16499 860 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 CCR3P51677 355 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 THOP1P52888 689 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 PRKCEQ02156 737 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 HSPA14Q0VDF9 509 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 CETN1Q12798 172 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 EAPPQ56P03 285 aaPredicted RBP10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 ARL6IP4Q66PJ3 421 aaKnown RBP10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 DUPD1Q68J44 220 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 CCDC62Q6P9F0 684 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 CHPFQ8IZ52 775 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 LRRC57Q8N9N7 239 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 KIAA0895Q8NCT3 520 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 SNF8Q96H20 258 aa10.89□□□□□ -0.67
EFCAB11-208ENST00000555872 HAPLN3Q96S86 360 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms