RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 HLXQ14774 488 aaPredicted RBP4.96□□□□□ -1.62
SNX6-204ENST00000555541 INAVAQ3KP66 663 aa4.96□□□□□ -1.62
SNX6-204ENST00000555541 GIMAP6Q6P9H5 292 aa4.96□□□□□ -1.62
SNX6-204ENST00000555541 ZNF782Q6ZMW2 699 aaPredicted RBP4.96□□□□□ -1.62
SNX6-204ENST00000555541 RASAL3Q86YV0 1011 aa4.96□□□□□ -1.62
SNX6-204ENST00000555541 PPM1NQ8N819 430 aa4.96□□□□□ -1.62
SNX6-204ENST00000555541 POC1BQ8TC44 478 aa4.96□□□□□ -1.62
SNX6-204ENST00000555541 CHAC2Q8WUX2 184 aa4.96□□□□□ -1.62
SNX6-204ENST00000555541 FAM126AQ9BYI3 521 aaPredicted RBP4.96□□□□□ -1.62
SNX6-204ENST00000555541 KLC4Q9NSK0 619 aa4.96□□□□□ -1.62
SNX6-204ENST00000555541 SERGEFQ9UGK8 458 aa4.96□□□□□ -1.62
SNX6-204ENST00000555541 TMA7Q9Y2S6 64 aaKnown RBP4.96□□□□□ -1.62
SNX6-204ENST00000555541 WNT6Q9Y6F9 365 aa4.96□□□□□ -1.62
SNX6-204ENST00000555541 ZNF804BA4D1E1 1349 aa4.96□□□□□ -1.62
SNX6-204ENST00000555541 PHLDB1Q86UU1 1377 aa4.95□□□□□ -1.62
SNX6-204ENST00000555541 LINC01548A6NM66 108 aa4.95□□□□□ -1.62
SNX6-204ENST00000555541 ORC4O43929 436 aa4.95□□□□□ -1.62
SNX6-204ENST00000555541 NXPH1P58417 271 aa4.95□□□□□ -1.62
SNX6-204ENST00000555541 CDC42EP1Q00587 391 aa4.95□□□□□ -1.62
SNX6-204ENST00000555541 ZNF844Q08AG5 666 aa4.95□□□□□ -1.62
SNX6-204ENST00000555541 SDE2Q6IQ49 451 aa4.95□□□□□ -1.62
SNX6-204ENST00000555541 ZNF365Q70YC5 407 aa4.95□□□□□ -1.62
SNX6-204ENST00000555541 VGLL2Q8N8G2 317 aa4.95□□□□□ -1.62
SNX6-204ENST00000555541 TMX3Q96JJ7 454 aa4.95□□□□□ -1.62
SNX6-204ENST00000555541 HAPLN3Q96S86 360 aa4.95□□□□□ -1.62
SNX6-204ENST00000555541 SLKQ9H2G2 1235 aaPredicted RBP4.95□□□□□ -1.62
SNX6-204ENST00000555541 IPPQ9Y573 584 aa4.95□□□□□ -1.62
SNX6-204ENST00000555541 FNDC1Q4ZHG4 1894 aaPredicted RBP4.94□□□□□ -1.62
SNX6-204ENST00000555541 VIL1P09327 827 aaKnown RBP4.94□□□□□ -1.62
SNX6-204ENST00000555541 PCSK6P29122 969 aa4.94□□□□□ -1.62
SNX6-204ENST00000555541 LLGL1Q15334 1064 aa4.94□□□□□ -1.62
SNX6-204ENST00000555541 SRSF7Q16629 238 aaKnown RBP eCLIP4.94□□□□□ -1.62
SNX6-204ENST00000555541 WDR66Q8TBY9 1149 aa4.94□□□□□ -1.62
SNX6-204ENST00000555541 FBXO41Q8TF61 875 aa4.94□□□□□ -1.62
SNX6-204ENST00000555541 SNX19Q92543 992 aa4.94□□□□□ -1.62
SNX6-204ENST00000555541 AMBRA1Q9C0C7 1298 aa4.94□□□□□ -1.62
SNX6-204ENST00000555541 PRSS29PA6NIE9 313 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 SGTAO43765 313 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 IGKV2-30P06310 120 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 CCKBRP32239 447 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 TLE1Q04724 770 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 ITIH3Q06033 890 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 KLF1Q13351 362 aaPredicted RBP4.93□□□□□ -1.62
SNX6-204ENST00000555541 EZH2Q15910 746 aaKnown RBP4.93□□□□□ -1.62
SNX6-204ENST00000555541 ATP2B3Q16720 1220 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 ZNF626Q68DY1 528 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 KRT26Q7Z3Y9 468 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 SPATS2Q86XZ4 545 aaKnown RBP4.93□□□□□ -1.62
SNX6-204ENST00000555541 CBARPQ8N350 705 aaPredicted RBP4.93□□□□□ -1.62
SNX6-204ENST00000555541 SLC17A8Q8NDX2 589 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 JADE3Q92613 823 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 PBKQ96KB5 322 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 IMPG2Q9BZV3 1241 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 TDP1Q9NUW8 608 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 LIMCH1Q9UPQ0 1083 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 BTBD3Q9Y2F9 522 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 PCDHB1Q9Y5F3 818 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 SPATA31A3Q5VYP0 1347 aa4.93□□□□□ -1.62
SNX6-204ENST00000555541 GCOM1H8Y6P7 765 aaPredicted RBP4.92□□□□□ -1.62
SNX6-204ENST00000555541 HTRA2O43464 458 aaPredicted RBP4.92□□□□□ -1.62
SNX6-204ENST00000555541 NTN1O95631 604 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 RHOP08100 348 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 PRR35P0CG20 571 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 NHLRC4P0CG21 123 aaPredicted RBP4.92□□□□□ -1.62
SNX6-204ENST00000555541 FOXG1P55316 489 aaPredicted RBP4.92□□□□□ -1.62
SNX6-204ENST00000555541 IL10RAQ13651 578 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 MTX3Q5HYI7 312 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 KRTAP5-1Q6L8H4 278 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 TAPT1Q6NXT6 567 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 ZNF517Q6ZMY9 492 aaPredicted RBP4.92□□□□□ -1.62
SNX6-204ENST00000555541 ZNF66Q6ZN08 573 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 FAM9AQ8IZU1 332 aaPredicted RBP4.92□□□□□ -1.62
SNX6-204ENST00000555541 REPS1Q96D71 796 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 FCRL4Q96PJ5 515 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 SERTAD4Q9NUC0 356 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 MRPS18AQ9NVS2 196 aaKnown RBP4.92□□□□□ -1.62
SNX6-204ENST00000555541 ETAA1Q9NY74 926 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 DKK3Q9UBP4 350 aa4.92□□□□□ -1.62
SNX6-204ENST00000555541 PCDHGA12O60330 932 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 NDUFS2O75306 463 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 CD1AP06126 327 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 JUPP14923 745 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 C5AR1P21730 350 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 DRD4P21917 467 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 NPTX2P47972 431 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 SLC10A2Q12908 348 aaPredicted RBP4.91□□□□□ -1.62
SNX6-204ENST00000555541 KLF9Q13886 244 aaPredicted RBP4.91□□□□□ -1.62
SNX6-204ENST00000555541 C3orf36Q3SXR2 165 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 RNF219Q5W0B1 726 aaPredicted RBP4.91□□□□□ -1.62
SNX6-204ENST00000555541 B3GALNT2Q8NCR0 500 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.91□□□□□ -1.62
SNX6-204ENST00000555541 SSH1Q8WYL5 1049 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 TRIB1Q96RU8 372 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 PCDHGA9Q9Y5G4 932 aaKnown RBP4.91□□□□□ -1.62
SNX6-204ENST00000555541 PCDHGA8Q9Y5G5 932 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 PCDHGA7Q9Y5G6 932 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 PCDHGA6Q9Y5G7 932 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 PCDHGA3Q9Y5H0 932 aa4.91□□□□□ -1.62
SNX6-204ENST00000555541 TARM1B6A8C7 271 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 TOR1BO14657 336 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms