RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 CYB561D2O14569 222 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 PSMA7O14818 248 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 ODC1P11926 461 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 IL9P15248 144 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 PSMC2P35998 433 aaKnown RBP15.31■□□□□ 0.04
SHMT2-217ENST00000555116 MCCD1P59942 119 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-217ENST00000555116 YWHAHQ04917 246 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-217ENST00000555116 LRRC63Q05C16 580 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 BFSP1Q12934 665 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 CTXN3Q4LDR2 81 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 ZNF280DQ6N043 979 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 FAM186BQ8IYM0 893 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 FEZF2Q8TBJ5 459 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 HDAC7Q8WUI4 952 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 SYAP1Q96A49 352 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-217ENST00000555116 EEF2KMTQ96G04 330 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 APOL5Q9BWW9 433 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 NUP62CLQ9H1M0 184 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 FBXW11Q9UKB1 542 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 XIRP2A4UGR9 3374 aa15.31■□□□□ 0.04
SHMT2-217ENST00000555116 DENND4AQ7Z401 1863 aa15.3■□□□□ 0.04
SHMT2-217ENST00000555116 CETN3O15182 167 aa15.3■□□□□ 0.04
SHMT2-217ENST00000555116 CST3P01034 146 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-217ENST00000555116 C4BPAP04003 597 aaKnown RBP15.3■□□□□ 0.04
SHMT2-217ENST00000555116 ROR1Q01973 937 aa15.3■□□□□ 0.04
SHMT2-217ENST00000555116 ENPEPQ07075 957 aa15.3■□□□□ 0.04
SHMT2-217ENST00000555116 KREMEN2Q8NCW0 462 aa15.3■□□□□ 0.04
SHMT2-217ENST00000555116 SUSD6Q92537 303 aa15.3■□□□□ 0.04
SHMT2-217ENST00000555116 MKNK1Q9BUB5 465 aa15.3■□□□□ 0.04
SHMT2-217ENST00000555116 PLEKHA4Q9H4M7 779 aa15.3■□□□□ 0.04
SHMT2-217ENST00000555116 GDAP2Q9NXN4 497 aa15.3■□□□□ 0.04
SHMT2-217ENST00000555116 USP15Q9Y4E8 981 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-217ENST00000555116 TTC28Q96AY4 2481 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 ARHGEF37A1IGU5 675 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 SYCE3A1L190 88 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 PAPLNO95428 1278 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 VAMP7P51809 220 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 AP3M2P53677 418 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 FKBP3Q00688 224 aaKnown RBP15.29■□□□□ 0.04
SHMT2-217ENST00000555116 SMAD2Q15796 467 aaKnown RBP15.29■□□□□ 0.04
SHMT2-217ENST00000555116 RARS2Q5T160 578 aaKnown RBP15.29■□□□□ 0.04
SHMT2-217ENST00000555116 TDRD10Q5VZ19 366 aaKnown RBP15.29■□□□□ 0.04
SHMT2-217ENST00000555116 WSCD1Q658N2 575 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 OVOS1Q6IE37 1185 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 KLHL10Q6JEL2 608 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 TTI2Q6NXR4 508 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 FOXR2Q6PJQ5 311 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 LRSAM1Q6UWE0 723 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 INTS8Q75QN2 995 aaKnown RBP15.29■□□□□ 0.04
SHMT2-217ENST00000555116 USP37Q86T82 979 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 NELFBQ8WX92 580 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 HPDLQ96IR7 371 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 DUSP9Q99956 384 aaKnown RBP15.29■□□□□ 0.04
SHMT2-217ENST00000555116 ADAM7Q9H2U9 754 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 SFXN1Q9H9B4 322 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 DSEQ9UL01 958 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 WDR27A2RRH5 827 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 ABLIM3O94929 683 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 CMASQ8NFW8 434 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-217ENST00000555116 RTP3Q9BQQ7 232 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 CDH22Q9UJ99 828 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 L1RE1Q9UN81 338 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 CTNND2Q9UQB3 1225 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 FAM50BQ9Y247 325 aa15.29■□□□□ 0.04
SHMT2-217ENST00000555116 OR6C75A6NL08 312 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 IKBKBO14920 756 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 RFPL2O75678 378 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 VNN1O95497 513 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 ITIH3Q06033 890 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 MYO1EQ12965 1108 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 ZACNQ401N2 412 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 C15orf39Q6ZRI6 1047 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 LIMS2Q7Z4I7 341 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 ZNF461Q8TAF7 563 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 OXCT2Q9BYC2 517 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-217ENST00000555116 XYLT2Q9H1B5 865 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 DPP7Q9UHL4 492 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 R3HCC1Q9Y3T6 440 aaKnown RBP15.28■□□□□ 0.04
SHMT2-217ENST00000555116 SNX9Q9Y5X1 595 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 NOTCH4Q99466 2003 aa15.28■□□□□ 0.04
SHMT2-217ENST00000555116 SLC16A3O15427 465 aaKnown RBP15.27■□□□□ 0.04
SHMT2-217ENST00000555116 ZMYND10O75800 440 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 STAU1O95793 577 aaKnown RBP15.27■□□□□ 0.04
SHMT2-217ENST00000555116 TRIM49P0CI25 452 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 TRIM49CP0CI26 452 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 EPB41P11171 864 aaKnown RBP15.27■□□□□ 0.04
SHMT2-217ENST00000555116 KRT13P13646 458 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 ARPP19P56211 112 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 MYL6P60660 151 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 PAK1Q13153 545 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 BIRC3Q13489 604 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 ELMSAN1Q6PJG2 1045 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 TMC5Q6UXY8 1006 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 SV2AQ7L0J3 742 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 GPR149Q86SP6 731 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 METTL23Q86XA0 190 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 PDCL2Q8N4E4 241 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 OR10T2Q8NGX3 314 aa15.27■□□□□ 0.04
SHMT2-217ENST00000555116 BICDL2A1A5D9 508 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 HUS1O60921 280 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms