RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 RPA1P27694 616 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 INHBCP55103 352 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 YWHAGP61981 247 aaKnown RBP eCLIP9.38□□□□□ -0.91
SYNE2-217ENST00000555022 PPP2R5EQ16537 467 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 TCHHL1Q5QJ38 904 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-217ENST00000555022 DCAF8Q5TAQ9 597 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 IRGCQ6NXR0 463 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 RIPOR1Q6ZS17 1223 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 FNBP1Q96RU3 617 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 TSSK1BQ9BXA7 367 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 TDRKHQ9Y2W6 561 aaKnown RBP9.38□□□□□ -0.91
SYNE2-217ENST00000555022 ADAMTS7Q9UKP4 1686 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 MEIS2O14770 477 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 AVILO75366 819 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 FUT4P22083 530 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 GCAP28676 217 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 GSTO1P78417 241 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 BASP1P80723 227 aaKnown RBP9.37□□□□□ -0.91
SYNE2-217ENST00000555022 CETN1Q12798 172 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 NCOA4Q13772 614 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 CYFIP1Q7L576 1253 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 TREML1Q86YW5 311 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 RNF148Q8N7C7 305 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 ZNF513Q8N8E2 541 aaPredicted RBP9.37□□□□□ -0.91
SYNE2-217ENST00000555022 OSBPL8Q9BZF1 889 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 PIH1D1Q9NWS0 290 aaKnown RBP9.37□□□□□ -0.91
SYNE2-217ENST00000555022 APPL1Q9UKG1 709 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 DAGLAQ9Y4D2 1042 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 ARP10275 920 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 DRG2P55039 364 aaKnown RBP9.37□□□□□ -0.91
SYNE2-217ENST00000555022 SPIRE1Q08AE8 756 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 MSS51Q4VC12 460 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 FAM102BQ5T8I3 360 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 SCARA3Q6AZY7 606 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 SPATA24Q86W54 205 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 RASSF3Q86WH2 238 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 FAM81AQ8TBF8 368 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 ETNPPLQ8TBG4 499 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 NSL1Q96IY1 281 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 ZNF184Q99676 751 aaPredicted RBP9.37□□□□□ -0.91
SYNE2-217ENST00000555022 BTBD10Q9BSF8 475 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 TRIM55Q9BYV6 548 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 CD209Q9NNX6 404 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 ZNF711Q9Y462 761 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 GPR75-ASB3A0A0A6YYF3 556 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 GALK1P51570 392 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 YARSP54577 528 aaKnown RBP9.37□□□□□ -0.91
SYNE2-217ENST00000555022 IGBP1P78318 339 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 ORC1Q13415 861 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 RASA2Q15283 850 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 POLNQ7Z5Q5 900 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 PRPF39Q86UA1 669 aaKnown RBP9.37□□□□□ -0.91
SYNE2-217ENST00000555022 PSPC1Q8WXF1 523 aaKnown RBP9.37□□□□□ -0.91
SYNE2-217ENST00000555022 LXNQ9BS40 222 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 WDR18Q9BV38 432 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 NDE1Q9NXR1 346 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 WHRNQ9P202 907 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 ANKFY1Q9P2R3 1169 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 SERPINB13Q9UIV8 391 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 MAGED2Q9UNF1 606 aaPredicted RBP9.37□□□□□ -0.91
SYNE2-217ENST00000555022 ASB3Q9Y575 518 aa9.37□□□□□ -0.91
SYNE2-217ENST00000555022 BCL9O00512 1426 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 TCRBV7S3A2A0A539 114 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 ESYT2A0FGR8 921 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 MAGEA13PA6NCF6 341 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 PEX1O43933 1283 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 CCDC22O60826 627 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 SLITRK3O94933 977 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 RHBDL3P58872 404 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 RPL7AP62424 266 aaKnown RBP9.36□□□□□ -0.91
SYNE2-217ENST00000555022 RALGPS1Q5JS13 557 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 IYDQ6PHW0 289 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 RHBDF2Q6PJF5 856 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 ZNF720Q7Z2F6 126 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 PALM2Q8IXS6 379 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 RBM15BQ8NDT2 890 aaKnown RBP9.36□□□□□ -0.91
SYNE2-217ENST00000555022 ATL2Q8NHH9 583 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 PYROXD1Q8WU10 500 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 FAM136AQ96C01 138 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 BICD1Q96G01 975 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 GCNAQ96QF7 691 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 SYT11Q9BT88 431 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 MANSC1Q9H8J5 431 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 LIN28AQ9H9Z2 209 aaKnown RBP9.36□□□□□ -0.91
SYNE2-217ENST00000555022 HSPBP1Q9NZL4 362 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 PCDHGB4Q9UN71 923 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 PCDHGB5Q9Y5G0 923 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 PLCH1Q4KWH8 1693 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 A0A1B0GUL6 1792 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 NUP98P52948 1817 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 LPXNO60711 386 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 CIB2O75838 187 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 EYA4O95677 639 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 HSPA6P17066 643 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 PDK4Q16654 411 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 PARP6Q2NL67 630 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 TNFAIP8L3Q5GJ75 292 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 MTHFD1LQ6UB35 978 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 MFSD7Q6UXD7 560 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 C3orf62Q6ZUJ4 267 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms