RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 LRRN2O75325 713 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 OAZ2O95190 189 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 KIF20AO95235 890 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 SEC24AO95486 1093 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 VNN1O95497 513 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 TNNC2P02585 160 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 HOXB8P17481 243 aaPredicted RBP13.31□□□□□ -0.28
SYNE2-214ENST00000554928 TYMPP19971 482 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 SP100P23497 879 aaPredicted RBP13.31□□□□□ -0.28
SYNE2-214ENST00000554928 STX17P56962 302 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 RBP5P82980 135 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 CREMQ03060 361 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 YWHAHQ04917 246 aaPredicted RBP13.31□□□□□ -0.28
SYNE2-214ENST00000554928 ZP2Q05996 745 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 ADAM9Q13443 819 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 MYBPC2Q14324 1141 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 SURF1Q15526 300 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 TDRD10Q5VZ19 366 aaKnown RBP13.31□□□□□ -0.28
SYNE2-214ENST00000554928 KLHL10Q6JEL2 608 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 ZNF280DQ6N043 979 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 ZC3H3Q8IXZ2 948 aaKnown RBP13.31□□□□□ -0.28
SYNE2-214ENST00000554928 APPL2Q8NEU8 664 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 UHRF1Q96T88 793 aaPredicted RBP13.31□□□□□ -0.28
SYNE2-214ENST00000554928 DUSP9Q99956 384 aaKnown RBP13.31□□□□□ -0.28
SYNE2-214ENST00000554928 ADAM7Q9H2U9 754 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 CRISPLD1Q9H336 500 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 POMKQ9H5K3 350 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 DZANK1Q9NVP4 752 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 KIAA1468Q9P260 1216 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 CTNND2Q9UQB3 1225 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 NME7Q9Y5B8 376 aa13.31□□□□□ -0.28
SYNE2-214ENST00000554928 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.31□□□□□ -0.28
SYNE2-214ENST00000554928 TSC2P49815 1807 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 CCDC195A0A1B0GUA6 201 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 FSD2A1L4K1 749 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 ABLIM3O94929 683 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 C4BPAP04003 597 aaKnown RBP13.3□□□□□ -0.28
SYNE2-214ENST00000554928 CYP11A1P05108 521 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 SRGAP2BP0DMP2 458 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 ODC1P11926 461 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 MYL6P60660 151 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 CLDN10P78369 228 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 PPP3CAQ08209 521 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 EDRF1Q3B7T1 1238 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 SV2CQ496J9 727 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 OVOS1Q6IE37 1185 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 PDXDC1Q6P996 788 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 RNF19BQ6ZMZ0 732 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 GPR149Q86SP6 731 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 FAM186BQ8IYM0 893 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 PDCL2Q8N4E4 241 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 LRRC52Q8N7C0 313 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 SLC7A14Q8TBB6 771 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 KHSRPQ92945 711 aaKnown RBP eCLIP13.3□□□□□ -0.28
SYNE2-214ENST00000554928 HPDLQ96IR7 371 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 ZNF560Q96MR9 790 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 PGLYRP2Q96PD5 576 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 GBP4Q96PP9 640 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 MED15Q96RN5 788 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 XYLT2Q9H1B5 865 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 SFXN1Q9H9B4 322 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.3□□□□□ -0.28
SYNE2-214ENST00000554928 POLIQ9UNA4 740 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 SNX9Q9Y5X1 595 aa13.3□□□□□ -0.28
SYNE2-214ENST00000554928 H7C4K7 107 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 CCL16O15467 120 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 ZMYND10O75800 440 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 C8AP07357 584 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 ACAT1P24752 427 aaKnown RBP13.29□□□□□ -0.28
SYNE2-214ENST00000554928 CCNE1P24864 410 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 VAMP7P51809 220 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 NTHL1P78549 312 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 CBX2Q14781 532 aaPredicted RBP13.29□□□□□ -0.28
SYNE2-214ENST00000554928 SOWAHAQ2M3V2 549 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 PUS10Q3MIT2 529 aaKnown RBP13.29□□□□□ -0.28
SYNE2-214ENST00000554928 TTI2Q6NXR4 508 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 LIMS2Q7Z4I7 341 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 USP37Q86T82 979 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 LRRTM3Q86VH5 581 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 TTC9BQ8N6N2 239 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 TMC2Q8TDI7 906 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 KBTBD7Q8WVZ9 684 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 NELFBQ8WX92 580 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 MMRN2Q9H8L6 949 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 TMLHEQ9NVH6 421 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 GDAP2Q9NXN4 497 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 FRMD4BQ9Y2L6 1034 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 TTC28Q96AY4 2481 aa13.29□□□□□ -0.28
SYNE2-214ENST00000554928 MUC3AQ02505 3323 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 NRG2O14511 850 aaPredicted RBP13.28□□□□□ -0.28
SYNE2-214ENST00000554928 SOAT2O75908 522 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 PAPLNO95428 1278 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 CPB1P15086 417 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 PSMC2P35998 433 aaKnown RBP13.28□□□□□ -0.28
SYNE2-214ENST00000554928 PNPLA4P41247 253 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 GCLMP48507 274 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 ITIH3Q06033 890 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 ADCY1Q08828 1119 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 BIRC3Q13489 604 aa13.28□□□□□ -0.28
SYNE2-214ENST00000554928 SPOPLQ6IQ16 392 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms