RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 ZNF365Q70YC5 407 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 TPCN2Q8NHX9 752 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 FAM149B1Q96BN6 582 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 TRIM11Q96F44 468 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 NIF3L1Q9GZT8 377 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 XPOTO43592 962 aaKnown RBP17.55■□□□□ 0.4
PCNX1-209ENST00000554879 TMEM253P0C7T8 217 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 RTP1P59025 263 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 AMHR2Q16671 573 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 CDO1Q16878 200 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 CYFIP2Q96F07 1278 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 MAK16Q9BXY0 300 aaKnown RBP17.55■□□□□ 0.4
PCNX1-209ENST00000554879 M0QYV0 167 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 ARL2P36404 184 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 AP3M2P53677 418 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 SESN3P58005 492 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 TDRD10Q5VZ19 366 aaKnown RBP17.54■□□□□ 0.4
PCNX1-209ENST00000554879 CXCL17Q6UXB2 119 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 PCYT2Q99447 389 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 ANKZF1Q9H8Y5 726 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 RBM12Q9NTZ6 932 aaKnown RBP17.54■□□□□ 0.4
PCNX1-209ENST00000554879 ALG6Q9Y672 507 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 QSER1Q2KHR3 1735 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 ATP11AP98196 1134 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 DUSP28Q4G0W2 176 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 BEST2Q8NFU1 509 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 GRID2IPA4D2P6 1211 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 MED7O43513 233 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 CDH8P55286 799 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 DYNLT1P63172 113 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 KCTD19Q17RG1 926 aaPredicted RBP17.54■□□□□ 0.4
PCNX1-209ENST00000554879 GKAP1Q5VSY0 366 aaPredicted RBP17.54■□□□□ 0.4
PCNX1-209ENST00000554879 TRIM74Q86UV6 250 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 TRIM73Q86UV7 250 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 FBF1Q8TES7 1133 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 RMI1Q9H9A7 625 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 NOC2LQ9Y3T9 749 aaKnown RBP17.54■□□□□ 0.4
PCNX1-209ENST00000554879 MAP2K7O14733 419 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 PPP1R37O75864 691 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 CDR2Q01850 454 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 MFSD10Q14728 455 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 PREPLQ4J6C6 727 aaPredicted RBP17.54■□□□□ 0.4
PCNX1-209ENST00000554879 BRSK2Q8IWQ3 736 aa17.54■□□□□ 0.4
PCNX1-209ENST00000554879 UHMK1Q8TAS1 419 aaKnown RBP17.54■□□□□ 0.4
PCNX1-209ENST00000554879 ACO2Q99798 780 aaKnown RBP17.54■□□□□ 0.4
PCNX1-209ENST00000554879 C17orf102A2RUQ5 167 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 AKAP5P24588 427 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 LNX1Q8TBB1 728 aaPredicted RBP17.53■□□□□ 0.4
PCNX1-209ENST00000554879 ARHGEF26Q96DR7 871 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 HPDLQ96IR7 371 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 ST6GALNAC4Q9H4F1 302 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 KLHL11Q9NVR0 708 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 RNF14Q9UBS8 474 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 MCM8Q9UJA3 840 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 RNF8O76064 485 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 PDGFRBP09619 1106 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 CA8P35219 290 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 CCDC38Q502W7 563 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 RSRC2Q7L4I2 434 aaKnown RBP17.53■□□□□ 0.4
PCNX1-209ENST00000554879 NPLOC4Q8TAT6 608 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 NTPCRQ9BSD7 190 aaKnown RBP17.53■□□□□ 0.4
PCNX1-209ENST00000554879 KATNAL1Q9BW62 490 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 TMEM134Q9H6X4 195 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 SAMD15Q9P1V8 674 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 NFU1Q9UMS0 254 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 A6NNZ2 444 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 TPD52L2O43399 206 aaKnown RBP17.53■□□□□ 0.4
PCNX1-209ENST00000554879 COMTP21964 271 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 TRIP13Q15645 432 aaPredicted RBP17.53■□□□□ 0.4
PCNX1-209ENST00000554879 TUBB8Q3ZCM7 444 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 PPTC7Q8NI37 304 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 RNF25Q96BH1 459 aaPredicted RBP17.53■□□□□ 0.4
PCNX1-209ENST00000554879 ZWILCHQ9H900 591 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 SNTG2Q9NY99 539 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 SALL4Q9UJQ4 1053 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 HPCAL4Q9UM19 191 aa17.53■□□□□ 0.4
PCNX1-209ENST00000554879 DIS3Q9Y2L1 958 aaKnown RBP17.53■□□□□ 0.4
PCNX1-209ENST00000554879 FSCN1Q16658 493 aaKnown RBP17.52■□□□□ 0.4
PCNX1-209ENST00000554879 C12orf56Q8IXR9 622 aa17.52■□□□□ 0.4
PCNX1-209ENST00000554879 C3orf20Q8ND61 904 aa17.52■□□□□ 0.4
PCNX1-209ENST00000554879 PLEKHO2Q8TD55 490 aa17.52■□□□□ 0.4
PCNX1-209ENST00000554879 HAUS1Q96CS2 278 aa17.52■□□□□ 0.4
PCNX1-209ENST00000554879 FAM49BQ9NUQ9 324 aa17.52■□□□□ 0.4
PCNX1-209ENST00000554879 ZC3H4Q9UPT8 1303 aaKnown RBP17.52■□□□□ 0.4
PCNX1-209ENST00000554879 A0A0B4J269 797 aa17.52■□□□□ 0.4
PCNX1-209ENST00000554879 PALB2Q86YC2 1186 aa17.52■□□□□ 0.4
PCNX1-209ENST00000554879 RNPC3Q96LT9 517 aaKnown RBP17.52■□□□□ 0.4
PCNX1-209ENST00000554879 KREMEN1Q96MU8 473 aa17.52■□□□□ 0.4
PCNX1-209ENST00000554879 CDT1Q9H211 546 aa17.52■□□□□ 0.4
PCNX1-209ENST00000554879 STIM2Q9P246 746 aa17.52■□□□□ 0.4
PCNX1-209ENST00000554879 LACTBL1A8MY62 500 aa17.52■□□□□ 0.39
PCNX1-209ENST00000554879 ANXA13P27216 316 aa17.52■□□□□ 0.39
PCNX1-209ENST00000554879 PTENP60484 403 aa17.52■□□□□ 0.39
PCNX1-209ENST00000554879 RBP5P82980 135 aa17.52■□□□□ 0.39
PCNX1-209ENST00000554879 ARHGAP1Q07960 439 aa17.52■□□□□ 0.39
PCNX1-209ENST00000554879 C1orf131Q8NDD1 294 aaKnown RBP17.52■□□□□ 0.39
PCNX1-209ENST00000554879 TLR10Q9BXR5 811 aa17.52■□□□□ 0.39
PCNX1-209ENST00000554879 SIX2Q9NPC8 291 aa17.52■□□□□ 0.39
PCNX1-209ENST00000554879 CISHQ9NSE2 258 aa17.52■□□□□ 0.39
PCNX1-209ENST00000554879 DDX20Q9UHI6 824 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms